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. 2024 Jul 3;64(14):5671–5679. doi: 10.1021/acs.jcim.4c00764

Figure 2.

Figure 2

Correlation between the predicted and experimental ΔΔG values of ligands across four different GPCRs. The results from AMBER-TI and AToM-OpenMM are depicted in cool (blue and cyan) and warm colors (red, yellow, and violet), respectively. The error bars are the standard errors of four independent AMBER-TI or AToM-OpenMM runs. The dashed 1:1 line indicates the perfect agreement. The dark- and light-shaded gray areas represent predictions within 1 and 2 kcal/mol from the experiment values, respectively. The figure also summarizes the overall MUE, RMSE, MCC, r, and ρ for the 53 pairs.