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. 2024 Jun 13;90(7):e00699-24. doi: 10.1128/aem.00699-24

TABLE 3.

Long-read sequencing summary of mutants created using RhaCAST system in B. cenocepacia K56-2 and B. multivorans ATCC17616

Mutants crRNA’s primer number Summary Distance of cargo integration (bp)a
K56-2 paaA::CAST-Tp 3390 On-target, integration of cargo only 63
K56-2 paaA::CAST-Tp 3422 On-target, integration of cargo only 61
K56-2 paaA::CAST-Tp 3423 On-target, integration of cargo only 63
K56-2 fliF::CAST-Tp 3463 On-target, integration of cargo only 67
K56-2 fliF::CAST-Tp 3466 On-target, integration of cargo only 64
K56-2 phbC::CAST-Tp 3469 On-target, integration of cargo only 64
K56-2 phbC::CAST-Tp 3472 On-target, integration of cargo only 64
K56-2::CAST-fugfp-Tp 3475 On-target, integration of cargo only 63
K56-2::CAST-fugfp-Tp 3478 On-target, integration of cargo only 64
K56-2::CAST-fugfp fliF::CAST-Tp 3475 On-target, integration of cargo only 60
K56-2::CAST-fugfp fliF::CAST-Tp 3475 On-target, whole-plasmid integrationb 63
ATCC 17616 paaA::CAST-Tp 3390 On-target, integration of cargo only 59
ATCC 17616 paaA::CAST-Tp 3422 On-target, whole-plasmid integrationb 65
ATCC 17616 paaA::CAST-Tp 3424 On-target, integration of cargo only 59
ATCC 17616 fliF::CAST-Tp 3463 On-target, whole-plasmid integrationb 60
a

From PAM to LE.

b

Co-integration of the cargo DNA and the whole plasmid.