TABLE 3.
Long-read sequencing summary of mutants created using RhaCAST system in B. cenocepacia K56-2 and B. multivorans ATCC17616
| Mutants | crRNA’s primer number | Summary | Distance of cargo integration (bp)a |
|---|---|---|---|
| K56-2 paaA::CAST-Tp | 3390 | On-target, integration of cargo only | 63 |
| K56-2 paaA::CAST-Tp | 3422 | On-target, integration of cargo only | 61 |
| K56-2 paaA::CAST-Tp | 3423 | On-target, integration of cargo only | 63 |
| K56-2 fliF::CAST-Tp | 3463 | On-target, integration of cargo only | 67 |
| K56-2 fliF::CAST-Tp | 3466 | On-target, integration of cargo only | 64 |
| K56-2 phbC::CAST-Tp | 3469 | On-target, integration of cargo only | 64 |
| K56-2 phbC::CAST-Tp | 3472 | On-target, integration of cargo only | 64 |
| K56-2::CAST-fugfp-Tp | 3475 | On-target, integration of cargo only | 63 |
| K56-2::CAST-fugfp-Tp | 3478 | On-target, integration of cargo only | 64 |
| K56-2::CAST-fugfp fliF::CAST-Tp | 3475 | On-target, integration of cargo only | 60 |
| K56-2::CAST-fugfp fliF::CAST-Tp | 3475 | On-target, whole-plasmid integrationb | 63 |
| ATCC 17616 paaA::CAST-Tp | 3390 | On-target, integration of cargo only | 59 |
| ATCC 17616 paaA::CAST-Tp | 3422 | On-target, whole-plasmid integrationb | 65 |
| ATCC 17616 paaA::CAST-Tp | 3424 | On-target, integration of cargo only | 59 |
| ATCC 17616 fliF::CAST-Tp | 3463 | On-target, whole-plasmid integrationb | 60 |
From PAM to LE.
Co-integration of the cargo DNA and the whole plasmid.