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. 2005 Apr 8;6:91. doi: 10.1186/1471-2105-6-91

Table 7.

Comparison between model structures and experimental structures for HPr

Structures Quantitiesa NMR target structure X-ray target structure
X-ray structure backbone RMSD [nm] 0.106 0
heavy atom RMSD [nm] 0.273 0
R-factor 0.073 0

best NMR structure backbone RMSD [nm] 0 0.106
heavy atom RMSD [nm] 0 0.273
R-factor 0 0.072

best model structure backbone RMSD [nm] 0.169 0.147
heavy atom RMSD [nm] 0.273 0.253
R-factor 0.093 0.076

model structure bundle backbone RMSD [nm] 0.178 0.154
heavy atom RMSD [nm] 0.277 0.258
R-factor 0.097 0.081

aBackbone RMSDs include NH, Cα, and C' atoms. Heavy atoms include all atoms except protons. RMSDs are pairwise RMSDs. R-factors are calculated using the R-factor R3 according to [46] including only signals arising from backbone protons.