Table 3.
Significant SNPs associated with teat number in this population
| Traita | Chr | SNP ID | Position (bp)b | MAF | P-Value | EPVc | Candidate Gene |
|---|---|---|---|---|---|---|---|
| TTN | 5 | WU_10.2_5_76130558 | 73,194,895 | 0.119 | 1.60E-06 | 3.33% | YAF2, ZCRB1, PDZRN4, PPHLN1, PRICKLE1, GXYLT1 |
| 5 | WU_10.2_5_76207514 | 73,241,384 | 0.119 | 1.60E-06 | |||
| LTN | 5 | WU_10.2_5_76130558 | 73,194,895 | 0.119 | 8.69E-06 | 2.69% | YAF2, ZCRB1, PDZRN4, PPHLN1, PRICKLE1, GXYLT1 |
| 5 | WU_10.2_5_76207514 | 73,241,384 | 0.119 | 8.69E-06 | |||
| RTN | 5 | WU_10.2_5_76130558 | 73,194,895 | 0.119 | 9.27E-06 | 2.67% | YAF2, ZCRB1, PDZRN4, PPHLN1, PRICKLE1, GXYLT1 |
| 5 | WU_10.2_5_76207514 | 73,241,384 | 0.119 | 9.27E-06 |
aTTN Total teat number, LTN Left teat number, RTN Right teat number
bSNP position in Ensembl (Position)
cExplained phenotypic variance