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. 2024 Jul 12;15:1402038. doi: 10.3389/fimmu.2024.1402038

Table 2.

Distribution and laboratory findings of IEIs in our series.

Category Disease N (%) Age at diagnosis (months)
median (range)
Associated flow cytometry findings
Findings %
Combined immunodeficiencies 163 (24.3%) 17 (1 – 552)
SCIDs 30 (4.5%) 5 (2 – 17) T cells < 300/μl 96.7%
Omenn Syndrome 8 (1.2%) 4.5 (1 – 10) Absent naïve T cells
Absent RTE
Absent B cells
100%
100%
100%
Leaky SCIDs 9 (1.3%) 19 (5 – 240) Decreased naïve T cells
Very low RTE
Reduced B cells
100%
100%
88.9%
MHC-II deficiency 35 (5.2%) 20 (1 – 132) Absent HLA-DR expression on B cells
CD4 lymphopenia
Inverted CD4/CD8 ratio
100%
88.6%
74.3%
Other CID 81 (49.7%) 36 (2 – 552) CD4 lymphopenia
Inverted CD4/CD8 ratio
Decreased naïve CD8 T cells
Decreased naïve CD4 T cells
74.1%
60.5%
95.8% *
81.9% *
CIDs with associated or syndromic features 101 (15.1%) 48 (1 – 204)
DiGeorge syndrome 7 (1.0%) 3 (2 – 11) CD3 lymphopenia 100%
Ataxia Telangiectasia 11 (1.6%) 90 (30 – 204) CD3 lymphopenia
Decreased naïve T cells
100%
100%
Wiskott-Aldrich syndrome 16 (2.4%) 8 (1 – 48) CD4 lymphopenia
Inverted CD4/CD8 ratio
Absent/reduced WASp expression
62.5%
62.5%
66.7% **
Hyper-IgE syndrome 57 (8.5%) 60 (8 – 192) Defective IL-17 production
Low CXCR3CCR6+ Th17 cells
Absent/reduced STAT3 phosphorylation
81.8%#
45.5%#
9.1%#
ARPC1B deficiency 2 (0.3%) 96 (72 – 120) Hyper-IgE
CD3 lymphopenia
Decreased naïve T cells
Expanded TCRαβ DNT
100%
100%
100%
50%
Predominantly antibody deficiencies 155 (23.1%) 96 (5 – 804)
Agammaglobulinemia 17 (2.5%) 36 (5 – 312) Severe decrease of sIg
Absent/profoundly decreased B cells
Absent Btk expression (in male patients)
100%
100%
100% ¥
CVID 70 (10.4%) 252 (18 – 804) Reduced switched memory B cells
Expanded transitional B cells
Expanded CD21lo B cells
80.9% §
23.8% §
28.6% §
Activated p110δ syndrome 2 (0.3%) 21 (18 – 24) Reduced switched memory B cells
Expanded transitional B cells
Decreased naïve T cells
100%
100%
100%
SIAD 15 (2.2%) 72 (30 – 624)
Unclassified antibody deficiency 53 (7.9%) 48 (5 – 708)
Diseases of immune dysregulation 49 (7.3%) 48 (1 – 336)
Chediak-Higashi Syndrome 9 (1.3%) 30 (1 – 84) Defective NK-cell degranulation assay 100% £
Griscelli Syndrome 1 (0.1%) 72
FHL 7 (1.0%) 14 (1 – 54) Defective/abnormal NK-cell degranulation 71.4%
ALPS 5 (0.7%) 42 (10 – 132) Increased TCRαβ DNT 100%
RIPK1 deficiency 4 (0.6%) 78 (48 – 144) Hypo-IgA and hypo-IgM
Reduced switched memory B cells
Elevated transitional B cells
CD4 lymphopenia
100%
100%
100%
100%
LRBA deficiency 3 (0.4%) 216 (156 – 336) Hypogammaglobulinemia
Reduced switched memory B cells Expanded CD21lo B cells
100%
100%
100%
TPP2 deficiency 2 (0.3%) 106 (32 – 180) Hypogammaglobulinemia
Reduced naïve T cells
100%
100%
IPEX syndrome 1 (0.1%) 17 Markedly decreased FoxP3+CD25+ regulatory T cells 100%
Congenital defects of phagocyte number or function 20 (3.0%) 23 (1 – 372)
Congenital neutropenia 8 (1.2%) 22.5 (3 – 36)
Cyclic neutropenia 2 (0.3%) 26.5 (23 – 30)
CGD 7 (1.0%) 36 (5 – 372) Absent/markedly reduced NADPH oxidase activity 100%
LAD-1 2 (0.3%) 9.5 (1 – 18) Absent CD18/CD11a expression 100%
Defects in intrinsic and innate immunity 12 (1.8%) 66 (18 – 252)
MSMD 4 (0.6%) 78 (30 – 252)
CMC 5 (0.7%) 36 (24 – 72) IL-17A production defect Hyperphosphorylation of STAT1 after IFN-γ stimulation 100%
100%
Autoinflammatory disorders 2 (0.3%) 84 (72 – 96)
Blau syndrome 1 (0.1%) 72
A20 deficiency 1 (0.1%) 96
Complement deficiencies 153 (22.8%) 288 (12 – 972)
C1 inhibitor deficiency 115 (17.2%) 336 (12 – 972)
Factor I deficiency 5 (0.7%) 426 (252 – 552)
Factor H deficiency 3 (0.4%) 348 (12 – 468)
CD46 deficiency 7 (1%) 240 (144 – 456) Absent CD46 expression on lymphocytes
Reduced CD46 expression on lymphocytes
85.7%
14.3%
C3 deficiency 2 (0.3%) 96 (72 – 120)
C7 deficiency 1 (0.1%) 264
CHAPLE disease 6 (0.9%) 72 (24 – 168) Absent CD55 expression on neutrophils 100%
Phenocopies of IEI Good syndrome 3 (0.4%) 780 (636 – 828) Hypogammaglobulinemia
Profoundly decreased B cells
Inverted CD4/CD8 ratio
100%
100%
100%
Unclassified immunodeficiencies 12 (1.8%) 36 (7 – 516)

*: naïve and memory T cells were analyzed in 72 patients.

**: WASp expression was assessed in 9 patients.

#: Th17, Il-17 production and STAT3 phosphorylation were assessed in 22 patients.

¥: Btk expression was assessed in 2 male patients.

§ : Phenotyping of circulating B-cell subpopulations was performed in 63 patients.

£ : NK-cell degranulation assay was performed in two patients.

ALPS, autoimmune lymphoproliferative syndrome; APDS, activated PI3K delta syndrome; ARPC1B, actin related protein 2/3 complex subunit 1B; Btk, Bruton’s tyrosine kinase; CGD, chronic granulomatous disease; CID, combined immunodeficiency; CHAPLE, complement hyperactivation angiopathic thrombosis and protein-losing enteropathy; CMC, chronic mucocutaneous candidiasis; CVID, common variable immunodeficiency; FHL, familial hemophagocytic lymphohistiocytosis; HLA, human leukocyte antigen; IPEX, immune dysregulation-polyendocrinopathy-enteropathy-x-linked; LRBA, LPS-responsive beige-like anchor protein; MHC, major histocompatibility complex; MSMD, mendelian susceptibility to mycobacterial disease, OS, Omenn syndrome; RIPK1, receptor-interacting serine/threonine-protein kinase 1; RTE, recent thymic emigrants; SCID, severe combined immunodeficiency; SIAD, selective IgA deficiency; sIg, serum immunoglobulins; TPP2, tripeptidyl peptidase 2; STAT, signal transducer and activator of transcription; WASp, Wiskott Aldrich syndrome protein.