Table 3:
Top docking ligands for each MPC structural model binding site with Glide docking scores
MPC Model | Conformation | Binding Site | Top binding | Top Glide Score |
---|---|---|---|---|
1.4 relaxed | OF | 1 | 7ACC2 | −7.268 |
Pioglitazone | −6.667 | |||
Troglitazone | −6.599 | |||
2 | UK-5099 | −5.218 | ||
7ACC2 | −4.964 | |||
Rosiglitazone | −4.504 | |||
1.2 unrelaxed | IF | 1 | Pioglitazone | −0.900 |
N/A | N/A | |||
N/A | N/A | |||
5 | Troglitazone | −8.903 | ||
Troglitazone | −7.886 | |||
Troglitazone | −7.474 | |||
1.5 unrelaxed | O | 1 | N/A | N/A |
N/A | N/A | |||
N/A | N/A | |||
3 | 7ACC2 | −4.731 | ||
UK-5099 | −4.310 | |||
Troglitazone | −4.112 | |||
4 | Troglitazone | −6.737 | ||
UK-5099 | −5.514 | |||
Ciglitazone | −5.560 | |||
2.3 relaxed | OF | 1 | Azemiglitazone | −7.986 |
UK-5099 | −7.840 | |||
Pioglitazone | −7.689 | |||
2 | Pioglitazone | −4.708 | ||
Ciglitazone | −4.489 | |||
Rosiglitazone | −4.203 |