Table 5.
The 52 bacterial species with significant differences (adjusted p < 0.05) in terms of average relative abundances (ar-Ab) and mean-standard deviation (sd), with 36 more abundant in PG and 16 in CG.
| Taxonomy (Phylum and Species) | CG | PG | Adjusted p |
|---|---|---|---|
| Phylum Firmicutes | ar-Ab (sd) | ar-Ab (sd) | |
| Blautia stercoris | 4.97 (19.43) | 7.11 (20.22) | 0.0034 |
| Paenibacillus brasilensis | 1.46 (2.02) | 0.68 (1.65) | 0.0062 |
| Oribacterium sinus | 1.39 (1.20) | 0.49 (0.56) | 0.0130 |
| Johnsonella ignava | 0.93 (3.77) | 0.08 (0.11) | 0.0012 |
| Marvinbryantia formatexigens | 0.80 (1.71) | 2.91 (2.18) | 0.0006 |
| Catonella morbi | 0.54 (0.46) | 1.31 (0.85) | 0.0056 |
| Hespellia stercorisuis | 0.36 (0.35) | 0.10 (0.10) | 0.0051 |
| Thermodesulfobium narugense | 0.13 (0.11) | 0.07 (0.14) | 0.0370 |
| Selenomonas flueggei | 0.12 (0.10) | 0.06 (0.12) | 0.0250 |
| Abiotrophia defectiva | 0.08 (0.16) | 0.57 (1.18) | 0.0023 |
| Halothermothrix orenii | 0.07 (0.18) | 0.28 (0.23) | 0.0029 |
| Filifactor villosus | 0.06 (0.06) | 0.02 (0.04) | 0.0160 |
| Butyrivibrio proteoclasticus | 0.06 (0.11) | 0.01 (0.02) | 0.0360 |
| Oribacterium asaccharolyticum | 0.06 (0.06) | 0.02 (0.04) | 0.0330 |
| Facklamia ignava | 0.05 (0.08) | 0.23 (0.23) | 0.0007 |
| Sporomusa ovata | 0.04 (0.14) | 0.09 (0.09) | 0.0160 |
| Pseudoramibacter alactolyticus | 0.03 (0.07) | 0.09 (0.10) | 0.0250 |
| Marininema halotolerans | 0.02 (0.06) | 0.16 (0.18) | 0.0021 |
| Clostridium tepidiprofundi | 0.01 (0.02) | 0 (0.02) | 0.0260 |
| Acetobacterium fimetarium | 0.01 (0.04) | 0.07 (0.09) | 0.0330 |
| Mahella australiensis | 0.01 (0.02) | 0.04 (0.06) | 0.0250 |
| Clostridium aminophilum | 0.01 (0.02) | 0.03 (0.05) | 0.0098 |
| Selenomonas sputigena | 0.01 (0.02) | 0.07 (0.14) | 0.0051 |
| Gelria glutamica | 0.01 (0.03) | 0.12 (0.11) | 0.0012 |
| Sporanaerobacter acetigenes | 0.01 (0.03) | 0.22 (0.31) | 0.0058 |
| Shimazuella kribbensis | 0.01 (0.04) | 0.10 (0.12) | 0.0110 |
| Carboxydocella manganica | 0 (0.01) | 0.05 (0.06) | 0.0055 |
| Phylum Bacteroidetes | ar-Ab (sd) | ar-Ab (sd) | |
| Bacteroides paurosaccharolyticus | 0.49 (1.97) | 0.51 (0.52) | 0.0120 |
| Prevotella loescheii | 0.20 (0.46) | 0.85 (1.38) | 0.0360 |
| Bacteroides heparinolyticus | 0.13 (0.15) | 0.05 (0.14) | 0.0340 |
| Sediminitomix flava | 0.07 (0.16) | 0.15 (0.15) | 0.0140 |
| Bacteroides barnesiae | 0.06 (0.12) | 0.16 (0.14) | 0.0058 |
| Prevotella marshii | 0.05 (0.08) | 0.01 (0.04) | 0.0160 |
| Perexilibacter aurantiacus | 0.02 (0.05) | 0.07 (0.07) | 0.0017 |
| Phylum Proteobacteria | ar-Ab (sd) | ar-Ab (sd) | |
| Escherichia/Shigella dysenteriae | 0.04 (0.12) | 1.14 (3.88) | 0.0098 |
| Plasticicumulans lactativorans | 0.04 (0.11) | 0.3 (0.39) | 0.0012 |
| Gamma proteobacterium | 0.03 (0.06) | 0.01 (0.04) | 0.0190 |
| Desulfosoma profundi | 0.02 (0.09) | 0.19 (0.24) | 0.0053 |
| Methylogaea oryzae | 0.02 (0.06) | 0.09 (0.12) | 0.0110 |
| Lysobacter sp. | 0.01 (0.04) | 0.05 (0.17) | 0.0150 |
| Desulfonema magnum | 0 (0.02) | 0.09 (0.16) | 0.0030 |
| Phylum Actinobacteria | ar-Ab (sd) | ar-Ab (sd) | |
| Geothrix fermentans | 0.02 (0.04) | 0.13 (0.20) | 0.0440 |
| Streptomyces auratus | 0.2 (0.19) | 0.07 (0.15) | 0.0053 |
| Egibacter rhizosphaerae | 0.03 (0.14) | 0.07 (0.18) | 0.0160 |
| Pseudoclavibacter soli | 0.02 (0.03) | 0.15 (0.25) | 0.0360 |
| Pseudonocardia nitrificans | 0.01 (0.02) | 0 (0.01) | 0.0340 |
| Gaiella occulta | 0 (0.01) | 0.03 (0.04) | 0.0420 |
| Others | ar-Ab (sd) | ar-Ab (sd) | |
| Hydrogenobaculum acidophilum | 0.08 (0.20) | 0.22 (0.16) | 0.0079 |
| Deferribacter autotrophicus | 0.07 (0.38) | 0.05 (0.07) | 0.0160 |
| Fibrobacter intestinalis | 0.04 (0.11) | 0.10 (0.10) | 0.0098 |
| Cerasicoccus frondis | 0.01 (0.03) | 0.07 (0.08) | 0.0140 |
| Verrucomicrobiales bacterium | 0 (0.01) | 0.03 (0.06) | 0.0053 |
Average relative abundance (ar-Ab) of bacterial species in parts per million followed by the standard deviation in parentheses (sd), which showed a significant difference between CG and PG (adjusted p < 0.05).