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. 2024 Jul 9;17(7):914. doi: 10.3390/ph17070914

Table 4.

Molecular docking scores of the five core compounds and four targets.

Target PDB ID Compound Affinity/(kcal·mol−1) Grid Center Grid Size
NF-κB1 1U36 Dexamethasone −9.17 (50.11, 22.21, 3.56) (90, 78, 66)
1U36 Oleanolic acid −6.6 (50.11, 22.21, 3.56) (90, 78, 66)
1U36 Syringic acid −3.87 (50.11, 22.21, 3.56) (90, 78, 66)
MAPK1 4S31 Ulixertinib −7.17 (−3.24, 7.31, 46.47) (98, 76, 106)
4S31 Oleanolic acid −8.14 (−3.24, 7.31, 46.47) (98, 76, 106)
4S31 Ferulic acid −4.57 (−3.24, 7.31, 46.47) (98, 76, 106)
4S31 Oleic acid −3.15 (−3.24, 7.31, 46.47) (98, 76, 106)
PTGTS2 5F19 Rofecoxib −7.08 (22.29, 44.99, 39.17) (62, 62, 84)
5F19 Oleanolic Acid −10.31 (22.29, 44.99, 39.17) (62, 62, 84)
5F19 Caffeic acid −5.83 (22.29, 44.99, 39.17) (62, 62, 84)
5F19 Syringic acid −5.6 (22.29, 44.99, 39.17) (62, 62, 84)
5F19 Oleic acid −5.27 (22.29, 44.99, 39.17) (62, 62, 84)
5F19 Ferulic acid −5.2 (22.29, 44.99, 39.17) (62, 62, 84)
TNF-α 2AZ5 Caffeic acid −5.37 (−13.12, 69.19, 26.69) (54, 52, 62)