Table 2.

GO analysis of DEGs in HCC samples.

Expression	Category	Term	Pathway	Count	P-value
Downregulated	GOTERM_BP	GO:0,019,752	Carboxylic acid metabolic process	8	0.000119
	GOTERM_BP	GO:0,043,436	Oxoacid metabolic process	8	0.000123
	GOTERM_BP	GO:0,051,186	Cofactor metabolic process	6	0.00019
	GOTERM_BP	GO:0,006,082	Organic acid metabolic process	8	0.000213
	GOTERM_BP	GO:0,044,712	Single-organism catabolic process	7	0.000978
	GOTERM_CC	GO:0,072,562	Blood microparticle	4	0.002264
	GOTERM_CC	GO:0,005,615	Extracellular space	8	0.009116
	GOTERM_CC	GO:0,071,682	Endocytic vesicle lumen	2	0.028872
	GOTERM_CC	GO:0,034,364	High-density lipoprotein particle	2	0.043832
	GOTERM_CC	GO:1,990,777	Lipoprotein particle	2	0.06505
	GOTERM_MF	GO:0,005,343	Organic acid:sodium symporter activity	3	0.000522
	GOTERM_MF	GO:0,005,319	Lipid transporter activity	4	0.000668
	GOTERM_MF	GO:0,015,370	Solute:sodium symporter activity	3	0.002592
	GOTERM_MF	GO:0,043,178	Alcohol binding	3	0.005814
Upregulated	GOTERM_BP	GO:0,007,049	Cell cycle	27	5.46281E−14
	GOTERM_BP	GO:0,022,402	Cell cycle process	24	5.56823E−13
	GOTERM_BP	GO:0,000,280	Nuclear division	17	4.77487E−12
	GOTERM_BP	GO:0,000,278	Mitotic cell cycle	20	1.00515E−11
	GOTERM_BP	GO:0,048,285	Organelle fission	17	1.26476E−11
	GOTERM_CC	GO:0,005,694	Chromosome	19	8.00975E−10
	GOTERM_CC	GO:0,044,427	Chromosomal part	16	6.50626E−08
	GOTERM_CC	GO:0,005,819	Spindle	10	7.84562E−07
	GOTERM_CC	GO:0,098,687	Chromosomal region	10	2.354E−06
	GOTERM_CC	GO:0,000,775	Chromosome, centromeric region	8	3.51466E−06
	GOTERM_MF	GO:0,005,524	ATP binding	17	2.26573E−06
	GOTERM_MF	GO:0,016,462	Pyrophosphatase activity	13	2.70007E−06
	GOTERM_MF	GO:0,016,818	Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	13	2.76894E−06
	GOTERM_MF	GO:0,016,817	Hydrolase activity, acting on acid anhydrides	13	2.83937E−06
	GOTERM_MF	GO:0,032,559	Adenyl ribonucleotide binding	17	3.09998E−06

GO gene ontology, BP biological process, CC cell component, MF molecular function.