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. 2024 Jul 29;25:730. doi: 10.1186/s12864-024-10621-7

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© The Author(s) 2024

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.

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Fig. 8 — Microbial signature agreement. Barplot represents the top-50 importances of the Species models, sorted. RF importances are in turquoise and SVM importances in orange. Left panels correspond to the Shotgun data, while right panels are for the 16S data. Species common to 16S and shotgun signatures are highlighted in blue. Note: Complete names of the 16S taxa that have been truncated in the plot:

• Sphingomonas echinoides/mali/oligophenolica/sanxanigenens

• Streptococcus salivarius/thermophilus/vestibularis

• Streptococcus australis/cristatus/gordonii/infantis/mitis/oralis/parasanguinis/pneumoniae/pseudopneumoniae/sanguinis

• Bacteroides fragilis/koreensis/kribbi/ovatus/xylanisolvens

• Enterococcus avium/casseliflavus/durans/faecium/gallinarum/hermanniensis/hirae/hiraes/phoeniculicola/raffinosus/saccharolyticus/thailandicu