Table 1.
De novo genome assembly results across all air samples from the controlled (Gh), natural (Nat) environment, and the urban microbiome dataset. Contigs were assembled and then used to identify metagenome-assemblies (MAGs), their taxonomic origin, completeness, and contamination.
| Sample | # contigs (mean) | N50 contigs (mean) | # MAGs | Species | Completeness [%] | Contamination [%] |
|---|---|---|---|---|---|---|
| Gh1h | 21 | 5928 | / | / | / | / |
| GH3h | 121 | 15 330 | 2 |
Paracoccus aerius
Paracoccus denitrificans |
64.59 63.41 |
2.94 1.46 |
| Nat3h | 204 | 7401 | / | / | / | / |
| Nat6h | 117 | 7282 | / | / | / | / |
| City center | 1170 | 23 151 | / | / | / | / |
| Residential area | 470 | 11 098 | / | / | / | / |
| Green belt | 1171 | 15 215 | 1 | Burkholderia sp. | 36.66 | 2.38 |
| Urban beach | 7732 | 21 049 | 1 | Stenotrophomonas maltophilia | 48.33 | 6.69 |
| Outer belt | 1874 | 10 282 | 1 | Salmonella enterica | 41.72 | 10.59 |