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. 1999 Oct;73(10):8890–8897. doi: 10.1128/jvi.73.10.8890-8897.1999

TABLE 1.

Sequences and positions of oligonucleotide primers and probes

Primer Sequence (5′–3′) Nucleotide position
5′ACT1 GAGAAGATCTGGCACCACAC 19–38a
3′ACT2 AGCCATCTCCTGCTCGAAGT 456–437a
5′ACTN1 CTGCGTGTGGCCCCCGAGGA 52–71a
3′ACTN2 GGTGCGGCCAGAGGCGTACA 216–197a
5′B1 GTGCTCAGCTCTCGGTCCTG 237–256b
3′B2 TTCGAATTGGAGTCGCTCAT 7368–7349b
5′C1 GAGCTCTCTTGCTCCCGAGA 256–275b
5′TR1 CAAAACAATCGTCGGTGGCT 4705–4724b
3′TR2 GATGGTGACATCATTGGACA 7320–7301b
3′TR2Hind GGCATCGATGGTGACATCATTGGACAAAACCAGGGCCGGGCAAGCTTGTAGc 7326–7276b
5′ALT TCCGGCAGCGGTCAG/CAAGTd 291–305/7247–7251b
X probe GTTGTTGGTTGGGGGCCCCACTCTCTACA 7252–7280b
ACT probe CCTCTGAACCCCAAGGCCAACCGTGAGAAGATGACCCAGATC 97–138a
a

Nucleotide position in the bovine actin sequence (11). 

b

Nucleotide position in the BLV sequence of Sagata et al. (42). 

c

Underline indicates point mutations from the sequence described by Sagata et al. (42). 

d

/, mRNA splice junction.