Table 5.

Mitochondrial gene/protein databases for identifying mitochondria-related genes in bulk transcriptomic datasets

Database name (latest release)	Available species	Evidence category	Reference
MitoCarta3.0 2020	human and mouse	•experimentally validated •manually curated from public databases and literature •computational predictions	Rath et al.139
MitoMiner4.0 2018	several species including human, mouse, and rat	•experimentally validated •manually curated from public databases and literature •computational predictions	Smith and Robinson138
Integrated Mitochondrial Protein Index (IMPI) 2021	several species including human, mouse, and rat	•MitoMiner4.0 data •machine-learning-based predictions	Smith et al.144
MitoProteome 2022	several species including human, mouse, and rat	•experimentally validated •manually curated from public databases and literature	Cotter et al.145