Antibodies |
|
Anti-Natriuretic peptides A antibody [EPR20247] |
Abcam |
Cat#ab209232 |
anti-cTnT polyclonal (rabbit) |
Abcam |
Cat#ab45932; RRID:AB_956386
|
anti-KCNQ1 polyclonal (rabbit) |
Abcam |
Cat#ab181798 |
|
Chemicals, peptides, and recombinant proteins |
|
Tricaine/MS-222 |
Sigma-Aldrich |
Cat#A5040 |
Methyl cellulose |
Sigma-Aldrich |
Cat#M0512 |
Cas9 protein |
IDT |
Cat#1081058 |
HMR-1556 |
Sigma-Aldrich |
Cat#SML2354 |
|
Critical commercial assays |
|
Hybridization Chain Reaction Probes and Hairpins Version 3 |
Molecular Instruments |
N/A |
DreamTaq Hot Start Green PCR Master Mix |
Thermo Scientific |
Cat#K9022 |
LA Taq DNA polymerase |
TaKaRa |
Cat#RR042B |
RNeasy Mini Kit |
QIAGEN |
Cat#74104 |
SuperScript IV VILO Master Mix |
Invitrogen |
Cat#11756050 |
KiCqStart SYBR Green qPCR ReadyMix |
Sigma-Aldrich |
Cat#KCQS00 |
iTaq Universal SYBR Green Supermix |
Bio-Rad |
Cat#1725121 |
|
Deposited data |
|
Adult zebrafish heart proteomics data |
ProteomeXchange Consortium |
PRIDE Identifier: PXD038300
|
|
Experimental models: Organisms/strains |
|
Zebrafish: AB wild-type |
ZIRC |
Cat#ZL1 |
Zebrafish: Tg(cmlc2:eGFP)
|
Tsai et al., 200356
|
ZDB-TGCONSTRCT-070117-164 |
Zebrafish: Tg(gata1:dsRed)
|
Zon et al., 200357
|
ZDB-TGCONSTRCT-070117-38 |
|
Oligonucleotides |
|
crRNA for ttna gRNA: AAGCTCAGTACGTTCTTCAC |
IDT |
N/A |
TracrRNA for ttna gRNA |
IDT |
N/A |
Forward primer for ttnaΔ9 genotyping: GCCTTCCTTCCACATTTATTTTCCA |
IDT |
N/A |
Reverse primer for ttnaΔ9 genotyping: CAGGCTATCAGTGCCCATCA |
IDT |
N/A |
Translation-blocking morpholino against nppa: TCAGAATTAGTCCCCCGGCCATCTC |
Becker et al.58
|
N/A |
Translation-blocking morpholino against nppb: TGTGAAGCGATTTCATGTCTCCTGA |
Becker et al.58
|
N/A |
Control morpholino: CCTCTTACCTCAGTTACAATTTATA |
Gene Tools |
SKU:PCO-StandardControl-100 |
gRNA for generating Δ9 deletion in TTN: TGTTTCAGATGTTGCAATCA |
IDT |
N/A |
HDR template for generating Δ9 deletion in TTN: CAATCATTGCACGCTTACTAATATCCTGGCCTT |
IDT |
N/A |
Primers/Probes for qPCR |
IDT |
See Table S2
|
|
Software and algorithms |
|
Imaris |
Bitplane |
https://imaris.oxinst.com/ |
GraphPad Prism |
GraphPad |
https://www.graphpad.com/ |
CHOPCHOP |
Labun et al.59
|
https://chopchop.cbu.uib.no/ |
AMT Imaging software V.7.0.1 |
Advanced Microscopy Techniques Corp. |
https://www.amtimaging.com/ |
Spinnaker SDK software |
FLIR |
https://www.flir.com/products/spinnaker-sdk/ |
Fiji/ImageJ |
Schindelin et al.60
|
https://fiji.sc/ |
Zen software |
Zeiss |
https://www.zeiss.com/microscopy/en/products/software/zeiss-zen.html |
LabScribe ECG recording software |
iWorx |
https://iworx.com/labscribe/?v=7516fd43adaa |
VisualSonics Echocardiogram Software |
Fujifilm |
VevoCQ |
OpenCV |
Open Source Computer Vision Library |
https://opencv.org |
scikit-learn |
Scikit-learn |
https://scikit-learn.org |
pCLAMP 10 |
Moleculardevices |
https://support.moleculardevices.com/s/article/Axon-pCLAMP-10-Electrophysiology-Data-Acquisition-Analysis-Software-Download-Page |
|
Other |
|
High-speed camera |
FLIR |
BFS-U3-17S7M-C |
Zebrafish ECG recording system |
iWorx |
ZS-200 |
Vevo2100 Imaging System |
Fujifilm |
Vevo2100 |
MX550S Ultrasound Transducer |
Fujifilm |
MX550S |
Axopatch Amplifier |
Moleculardevices |
200B |
PatchStar Micromanipulator |
Scientifica |
https://www.scientifica.uk.com/products/scientifica-patchstar-micromanipulator |
Nikon Eclipse |
Nikon |
Ti |
Axon Digidata |
Moleculardevices |
1550A |