Table 2.
Uncorrelated and significantly differentially methylated CpG sites between paired tumour and adjacent benign diagnostic samples.
| CpG | Chr | Position | Gene | Gene Region | Bonferroni | deltaβ |
|---|---|---|---|---|---|---|
| cg11213690 | 7 | 149,112,402 | Intergenic | Intergenic | 2.92E−18 | 0.48 |
| cg06832339 | 7 | 23,842,119 | STK31 | Body | 4.19E−18 | 0.42 |
| cg09414673 | 7 | 1,022,797 | CYP2W1 | TSS200 | 1.10E−17 | 0.45 |
| cg05415131 | 11 | 58,940,866 | DTX4 | Body | 5.06E−17 | 0.54 |
| cg26310256 | 23 | 13,588,301 | EGFL6 | Body | 1.09E−16 | 0.52 |
| cg03217795 | 16 | 23,847,556 | PRKCB | 1st Exon | 1.17E−16 | 0.42 |
| cg03225210 | 7 | 143,579,951 | FAM115A | 5'UTR | 1.79E−16 | 0.49 |
| cg16670497 | 1 | 110,210,913 | GSTM2 | Body | 2.52E−16 | 0.54 |
| cg14621217 | 17 | 80,944,134 | B3GNTL1 | Body | 6.20E−16 | 0.45 |
| cg16709294 | 14 | 70,235,567 | SFRS5; LOC100289511 | Body; TSS1500 | 6.81E−16 | 0.43 |
| cg21918559 | 23 | 36,976,052 | Intergenic | Intergenic | 9.36E−16 | 0.48 |
| cg14775423 | 4 | 57,372,356 | ARL9 | 5'UTR | 1.74E−15 | 0.42 |
| cg14179575 | 18 | 13,826,399 | MC5R | 1st Exon | 2.43E−15 | 0.42 |
| cg05057720 | 14 | 38,724,675 | CLEC14A | 1st Exon | 4.26E−15 | 0.5 |
| cg19713460 | 22 | 39,745,530 | SYNGR1 | TSS1500 | 6.48E−15 | 0.44 |
| cg00927554 | 12 | 95,941,920 | USP44 | 5'UTR | 4.16E−11 | 0.41 |