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. 2024 Jul 18;45(4):711–723. doi: 10.24272/j.issn.2095-8137.2023.311

Table 2. Best partitioning schemes and corresponding nucleotide substitution models of all mitogenomes used in phylogenetic inferences within Silurus.

Scheme number Partition scheme Best model
1 ATP6_1st, ND1_1st, ND2_1st, ND3_1st, ND4_1st, ND5_1st, CYTB _1st GTR+I+G
2 ATP6_2ed, ATP8_2ed, ND1_2ed, ND2_2ed, ND3_2ed, ND4_2ed, ND5_2ed GTR+I+G
3 ATP6_3rd, COIII_3rd, ND1_3rd, ND2_3rd, ND3_3rd, ND4_3rd, ND4L_3rd, ND5_3rd, CYTB_3rd GTR+I+G
4 ATP8_2ed, 22tRNAs HKY+I+G
5 ATP8_3rd, 12sRNA, 16sRNA GTR+I+G
6 COIII_1st, COI_1st, COII_1st, ND4L_1st TIMEF+I+G
7 COI_2ed, COII_2ed, COIII_2ed, ND4L_2st, CYTB_2ed HKY+I
8 COI_3rd, COII_3rd TRN+I+G
9 ND6_1st, ND6_2ed HKY+I+G
10 ND6_3rd TRN+G