Skip to main content
Biochemical Journal logoLink to Biochemical Journal
. 1991 Dec 1;280(Pt 2):499–506. doi: 10.1042/bj2800499

Accumulation of acyl-enzyme in DD-peptidase-catalysed reactions with analogues of peptide substrates.

M Jamin 1, M Adam 1, C Damblon 1, L Christiaens 1, J M Frère 1
PMCID: PMC1130576  PMID: 1747125

Abstract

Thioester substrates can be used to study the hydrolysis and transfer reactions catalysed by beta-lactamases and DD-peptidases. With the latter enzymes, accumulation of the acyl-enzyme can be detected directly. The efficiency of various amines as acceptor substrates was in excellent agreement with previous results obtained with peptide substrates of the DD-peptidases. The results indicated the presence of a specific binding site for the acceptor substrates. Although most of the results agreed well with a simple partition model, more elaborate hypotheses will be needed to account for all the data presented.

Full text

PDF

Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Adam M., Damblon C., Plaitin B., Christiaens L., Frère J. M. Chromogenic depsipeptide substrates for beta-lactamases and penicillin-sensitive DD-peptidases. Biochem J. 1990 Sep 1;270(2):525–529. doi: 10.1042/bj2700525. [DOI] [PMC free article] [PubMed] [Google Scholar]
  2. De Meester F., Joris B., Reckinger G., Bellefroid-Bourguignon C., Frère J. M., Waley S. G. Automated analysis of enzyme inactivation phenomena. Application to beta-lactamases and DD-peptidases. Biochem Pharmacol. 1987 Jul 15;36(14):2393–2403. doi: 10.1016/0006-2952(87)90609-5. [DOI] [PubMed] [Google Scholar]
  3. Frère J. M. Enzymic mechanisms involving concomitant transfer and hydrolysis reactions. Biochem J. 1973 Nov;135(3):469–481. doi: 10.1042/bj1350469. [DOI] [PMC free article] [PubMed] [Google Scholar]
  4. Frère J. M., Ghuysen J. M., Iwatsubo M. Kinetics of interaction between the exocellular DD-carboxypeptidase-transpeptidase from Streptomyces R61 and beta-lactam antibiotics. A choice of models. Eur J Biochem. 1975 Sep 15;57(2):343–351. doi: 10.1111/j.1432-1033.1975.tb02307.x. [DOI] [PubMed] [Google Scholar]
  5. Frère J. M., Ghuysen J. M., Perkins H. R., Nieto M. Kinetics of concomitant transfer and hydrolysis reactions catalysed by the exocellular DD-carboxypeptidase-transpeptidase of streptomyces R61. Biochem J. 1973 Nov;135(3):483–492. doi: 10.1042/bj1350483. [DOI] [PMC free article] [PubMed] [Google Scholar]
  6. Frère J. M., Moreno R., Ghuysen J. M. Molecular weight, amino acid composition and physicochemical properties of the exocellular DD-carboxypeptidase-transpeptidase of Streptomyces R39. Biochem J. 1974 Oct;143(1):233–240. doi: 10.1042/bj1430233. [DOI] [PMC free article] [PubMed] [Google Scholar]
  7. Frére J. M., Leyh-Bouille M., Ghuysen J. M., Nieto M., Perkins H. R. Exocellular DD-carboxypeptidases-transpeptidases from Streptomyces. Methods Enzymol. 1976;45:610–636. doi: 10.1016/s0076-6879(76)45054-1. [DOI] [PubMed] [Google Scholar]
  8. Fuad N., Frère J. M., Ghuysen J. M., Duez C., Iwatsubo M. Mode of interaction between beta-lactam antibiotics and the exocellular DD-carboxypeptidase--transpeptidase from Streptomyces R39. Biochem J. 1976 Jun 1;155(3):623–629. doi: 10.1042/bj1550623. [DOI] [PMC free article] [PubMed] [Google Scholar]
  9. Govardhan C. P., Pratt R. F. Kinetics and mechanism of the serine beta-lactamase catalyzed hydrolysis of depsipeptides. Biochemistry. 1987 Jun 16;26(12):3385–3395. doi: 10.1021/bi00386a021. [DOI] [PubMed] [Google Scholar]
  10. Leyh-Bouille M., Coyette J., Ghuysen J. M., Idczak J., Perkins H. R., Nieto M. Penicillin-sensitive DD-carboxypeptidase from Streptomyces strain R 61. Biochemistry. 1971 May 25;10(11):2163–2170. doi: 10.1021/bi00787a032. [DOI] [PubMed] [Google Scholar]
  11. Matagne A., Misselyn-Bauduin A. M., Joris B., Erpicum T., Granier B., Frère J. M. The diversity of the catalytic properties of class A beta-lactamases. Biochem J. 1990 Jan 1;265(1):131–146. doi: 10.1042/bj2650131. [DOI] [PMC free article] [PubMed] [Google Scholar]
  12. Nieto M., Perkins H. R., Frère J. M., Ghuysen J. M. Fluorescence and circular dichroism studies on the Streptomyces R61 DD-carboxypeptidase-transpeptidase. Penicillin binding by the enzyme. Biochem J. 1973 Nov;135(3):493–505. doi: 10.1042/bj1350493. [DOI] [PMC free article] [PubMed] [Google Scholar]
  13. Pazhanisamy S., Govardhan C. P., Pratt R. F. Beta-lactamase-catalyzed aminolysis of depsipeptides: amine specificity and steady-state kinetics. Biochemistry. 1989 Aug 22;28(17):6863–6870. doi: 10.1021/bi00443a013. [DOI] [PubMed] [Google Scholar]
  14. Pazhanisamy S., Pratt R. F. Beta-lactamase-catalyzed aminolysis of depsipeptides: peptide inhibition and a new kinetic mechanism. Biochemistry. 1989 Aug 22;28(17):6875–6882. doi: 10.1021/bi00443a015. [DOI] [PubMed] [Google Scholar]
  15. Pazhanisamy S., Pratt R. F. Beta-lactamase-catalyzed aminolysis of depsipeptides: proof of the nonexistence of a specific D-phenylalanine/enzyme complex by double-label isotope trapping. Biochemistry. 1989 Aug 22;28(17):6870–6875. doi: 10.1021/bi00443a014. [DOI] [PubMed] [Google Scholar]
  16. Perkins H. R., Nieto M., Frére J. M., Leyh-Bouille M., Ghuysen J. M. Streptomyces DD-carboxypeptidases as transpeptidases. The specificity for amino compounds acting as carboxyl acceptors. Biochem J. 1973 Apr;131(4):707–718. doi: 10.1042/bj1310707. [DOI] [PMC free article] [PubMed] [Google Scholar]
  17. Pratt R. F., Govardhan C. P. beta-Lactamase-catalyzed hydrolysis of acyclic depsipeptides and acyl transfer to specific amino acid acceptors. Proc Natl Acad Sci U S A. 1984 Mar;81(5):1302–1306. doi: 10.1073/pnas.81.5.1302. [DOI] [PMC free article] [PubMed] [Google Scholar]

Articles from Biochemical Journal are provided here courtesy of The Biochemical Society

RESOURCES