Table 2.
Antibodies used for immunocytochemistry | |||
---|---|---|---|
Antibody | Dilution | Company Cat # | |
Stemness Markers | Rabbit anti-OCT4 Rabbit anti-Nanog (D73G4) Mouse anti-TRA-1–60 Mouse anti-SSEA4 (clone MC813) |
1:500 1:200 1:500 1:500 |
Abcam Cat# ab19857 Cell Signaling Technology Cat# 4903 Cell Signaling Technology Cat # 4746 Cell Signaling Technology Cat #4755 |
Differentiation Markers | Mouse anti-Nestin Mouse anti-Beta-3 Tubulin Rabbit anti-Brachyury (D2Z3J) Rabbit anti-SOX17 (D1T8M) |
1:500 1:1000 1:500 1:500 |
Abcam Cat# ab18102 Abcam Cat# ab7751 Cell Signaling Cat# 81694 Cell Signaling Cat# 81778 |
Secondary antibodies | Goat Anti-Mouse Alexa Fluor 488 Goat Anti-Rabbit Alexa Fluor 555 |
1:500 1:500 |
Thermo Fisher Scientific Cat# a11029 Thermo Fisher Scientific Cat# a21429 |
Primers | |||
Target | Size of band | Forward/Reverse primer (5′-3′) | |
Episomal Plasmids (qPCR) | eOCT4 eLIN28 eSOX2 eKLF4 |
70–150 bp 70–150 bp 70–150 bp 70– 150 bp |
Fwd: CAT TCA AAC TGA GGT AAG GG Rev: TAG CGT AAA AGG AGC AAC ATA G Fwd: AGC CAT ATG GTA GCC TCA TGT CCG C Rev: TAG CGT AAA AGG AGC AAC ATA G Fwd: TTC ACA TGT CCC AGC ACT ACC AGA Rev: TTT GTT TGA CAG GAG CGA CAA T Fwd: CCA CCT CGC CTT ACA CAT GAA GA Rev: TAG CGT AAA AGG AGC AAC ATA G |
Stemness Markers (qPCR) | OCT4 L-MYC SOX2 |
70–150 bp 70–150 bp 70–150 bp |
Fwd: CCC CAG GGC CCC ATT TTG GTA CC Rev: ACC TCA GTT TGA ATG CAT GGG AGA GC Fwd: GCG AAC CCA AGA CCC AGG CCT GCT CC Rev: CAG GGG GTC TGC TCG CAC CGT GAT G Fwd: TTC ACA TGT CCC AGC ACT ACC AGA Rev: TCA CAT GTG TGA GAG GGG CAG TGT GC |
House-Keeping Genes (qPCR) | GAPDH | 70–150 bp |
Fwd: GGA AGG ACT CAT GAC CAC AGT Rev: GGA TGA TGT TCT GGA GAG CCC |
Genotyping | chr2:86,251,853–86,252,186 (spanning REEP1 Exon 5) | 334 bp |
Fwd: CCC AGC AAG AAC AAG GAT TG Rev: CCA CTG ATT GGT CCT TAG CC |