Figure 4.

Comparison of experimental structure of protein (PDB ID 7SF8 [78]) and predicted structure by AlphaFold2. (A) PDB file of 7SF8 [78] shown in PyMOL [80]. (B) Predicted structure by AlphaFold2 with confidence scores using protein sequence (PDB ID 7SF8 [78]). A higher score means the model is more confident in the correctness of the predictions. (C) Figures (A) and (B) are shown together in PyMOL [80]. Purple is the AlphaFold2 prediction. (D–F) The zoomed-in area where AlphaFold2 has low confidence scores. There are some significant differences in these areas.