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. 2024 Jun 22;52(14):e63. doi: 10.1093/nar/gkae528

Figure 3.

Figure 3.

Pangenome analysis of permafrost prokaryotes. (A) Constellation plot of prokaryotic SLCs (yellow indicates multi-sample MAG). (B) Clustermap of transformed SLC abundances with Aitchison distance for samples and pairwise variance log-ratio for SLCs. (C) Graph of Leiden community detection for positive associations calculated from partial correlation with basis shrinkage. (D) Weighted degree shown as node connectivity of Leiden graph.