Table 4.
Genome stats for case study 2
| Genome cluster | Genome | Surface depth | Taxonomy |
|---|---|---|---|
| PSLC-1 | Multisample__CONCOCT__P.1__24 | d__Bacteria;p__Actinomycetota;c__Humimicrobiia;o__Humimicrobiales; | |
| f__Humimicrobiaceae;g__Hydromicrobium;s__ | |||
| SRR13615823__METABAT2__P.1__bin.4 | -16.6m | d__Bacteria;p__Atribacterota;c__JS1;o__SB-45; | |
| f__34–128;g__34–128;s__34–128 sp014894735 | |||
| SRR13615824__METABAT2__P.1__bin.14_sub | -14.8m | d__Bacteria;p__Atribacterota;c__JS1;o__SB-45; | |
| f__34–128;g__34–128;s__34–128 sp014894735 | |||
| SRR13615824__METABAT2__P.1__bin.7_sub | -14.8m | d__Bacteria;p__Actinomycetota;c__Humimicrobiia;o__Humimicrobiales; | |
| f__Humimicrobiaceae;g__Hydromicrobium;s__Hydromicrobium sp018894445 | |||
| SRR13615825__MAXBIN2-107__P.1__bin.002_sub | -14.1m | d__Bacteria;p__Atribacterota;c__JS1;o__SB-45; | |
| f__34–128;g__34–128;s__ | |||
| SRR13615825__METABAT2__P.1__bin.5 | -14.1m | d__Bacteria;p__Actinomycetota;c__Humimicrobiia;o__Humimicrobiales; f__Humimicrobiaceae;g__Hydromicrobium;s__ Hydromicrobium sp018894445 | |
| SRR13615826__MAXBIN2-40__P.1__bin.002 | -7.2m | d__Bacteria;p__Atribacterota;c__JS1;o__SB-45; | |
| f__34–128;g__34–128;s__34–128 sp014894735 | |||
| PSLC-2 | SRR13615824__CONCOCT__P.3__28_sub | -14.8m | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__ Anaerolineales; |
| f__EnvOPS12;g__UBA877;s__ | |||
| SRR13615825__METABAT2__P.1__bin.6 | -14.1m | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales; | |
| f__EnvOPS12;g__UBA877;s__ | |||
| SRR13615826__CONCOCT__P.5__1_sub | -7.2m | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales; | |
| f__EnvOPS12;g__UBA877;s__ | |||
| PSLC-3 | SRR13615824__CONCOCT__P.1__34 | -14.8m | d__Archaea;p__Thermoplasmatota;c__E2;o__DHVEG-1; |
| f__DHVEG-1;g__SM1-50;s__SM1-50 sp014894395 | |||
| SRR13615825__CONCOCT__P.1__20 | -14.1m | d__Archaea;p__Thermoplasmatota;c__E2;o__DHVEG-1; | |
| f__DHVEG-1;g__SM1-50;s__SM1-50 sp014894395 | |||
| SRR13615826__METABAT2__P.1__bin.5 | -7.2m | d__Archaea;p__Thermoplasmatota;c__E2;o__DHVEG-1; | |
| f__DHVEG-1;g__SM1-50;s__SM1-50 sp014894395 | |||
| PSLC-4 | SRR13615824__METABAT2__P.1__bin.3 | -14.8m | d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales; |
| f__RBG-16–66-30;g__RBG-16–66-30;s__RBG-16–66-30 sp014894455 | |||
| SRR13615825__METABAT2__P.1__bin.4 | -14.1m | d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales; | |
| f__RBG-16–66-30;g__RBG-16–66-30;s__RBG-16–66-30 sp014894455 | |||
| SRR13615826__METABAT2__P.1__bin.3 | -7.2m | d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales; | |
| f__RBG-16–66-30;g__RBG-16–66-30;s__RBG-16–66-30 sp014894455 | |||
| PSLC-5 | Multisample__CONCOCT__P.1__30_sub | d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales; | |
| f__Fen-181;g__;s__ | |||
| SRR13615824__CONCOCT__P.3__6 | -14.8m | d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales; | |
| f__Fen-181;g__;s__ | |||
| SRR13615825__CONCOCT__P.1__8_sub | -14.1m | d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales; | |
| f__Fen-181;g__;s__ | |||
| PSLC-6 | SRR13615824__MAXBIN2-40__P.1__bin.016_sub | -14.8m | d__Bacteria;p__Spirochaetota;c__Spirochaetia;o__SZUA-6; |
| f__Fen-1364;g__;s__ | |||
| SRR13615825__CONCOCT__P.1__19_sub | -14.1m | d__Bacteria;p__Spirochaetota;c__Spirochaetia;o__SZUA-6; | |
| f__Fen-1364;g__;s__ | |||
| PSLC-7 | Multisample__METABAT2__P.3__bin.11 | d__Bacteria;p__Actinomycetota;c__Humimicrobiia;o__Humimicrobiales; | |
| f__Humimicrobiaceae;g__JAHILC01;s__ | |||
| SRR13615823__CONCOCT__P.1__3_sub | -16.6m | d__Bacteria;p__Actinomycetota;c__Humimicrobiia;o__Humimicrobiales; | |
| f__Humimicrobiaceae;g__JAHILC01;s__ | |||
| PSLC-8 | Multisample__CONCOCT__P.1__62 | d__Bacteria;p__JANLFM01;c__JANLFM01;o__JANLFM01; | |
| f__;g__;s__ | |||
| PSLC-9 | SRR13615824__MAXBIN2-107__P.3__bin.004_sub | -14.8m | d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__FEN-1346; |
| f__FEN-1346;g__;s__ | |||
| PSLC-10 | SRR13615824__CONCOCT__P.2__20_sub | -14.8m | d__Bacteria;p__Desulfobacterota;c__Syntrophia;o__Syntrophales; |
| f__Smithellaceae;g__;s__ | |||
| PSLC-11 | SRR13615826__CONCOCT__P.1__38 | -7.2m | d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__FEN-1346; |
| f__FEN-1346;g__VGYT01;s__ | |||
| PSLC-12 | SRR13615826__CONCOCT__P.1__1_sub | -7.2m | d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__DSTF01; |
| f__JALHUB01;g__JALHUB01;s__ | |||
| PSLC-13 | SRR13615824__METABAT2__P.2__bin.1 | -14.8m | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales; |
| f__Anaerolineaceae;g__UBA700;s__ | |||
| PSLC-14 | SRR13615821__CONCOCT__P.1__6 | -20m | d__Bacteria;p__Actinomycetota;c__Actinomycetia;o__Propionibacteriales; |
| f__Propionibacteriaceae;g__Cutibacterium;s__Cutibacterium acnes | |||
| PSLC-15 | SRR13615824__CONCOCT__P.1__13 | -14.8m | d__Archaea;p__Thermoproteota;c__Bathyarchaeia;o__B26-1; |
| f__UBA233;g__PALSA-986;s__ | |||
| PSLC-16 | SRR13615824__METABAT2__P.1__bin.4_sub | -14.8m | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales; |
| f__VadinHA17;g__LD21;s__ | |||
| PSLC-17 | SRR13615824__CONCOCT__P.1__3_sub | -14.8m | d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Sedimentisphaerales; |
| f__SG8-4;g__Fen-1362;s__ |