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. Author manuscript; available in PMC: 2024 Aug 11.
Published in final edited form as: HPB (Oxford). 2024 May 21;26(8):1082–1085. doi: 10.1016/j.hpb.2024.05.005

Table 1. Pathogenic germline variants in PDAC patients.

A: 1203 PDAC patients underwent expanded germline testing through the Detect Hereditary Pancreatic Cancer initiative and 20.4% were found to have PGVs. Ordering practitioners added a pancreatitis panel to 445 of the 1203 cases and CFTR pathogenic variants were prevalent and most common 53/445. The alterations are listed by prevalence (%). All variants listed are confirmed pathogenic. B: Pathogenic germline variants within CFTR found in patients with pancreatic adenocarcinoma

Gene n (%) Gene n (%)
A
CFTR 53 (11.9%) TP53 3 (0.2%)
BRCA2 29 (2.4%) PRSS1 1 (0.2%)
ATM 28 (2.3%) BLM 2 (0.2%)
SPINK1 8 (1.8%) BARD1 2 (0.2%)
MUTYH 21 (1.8%) HOXB13 2 (0.2%)
CHEK2 20 (1.7%) RAD50 2 (0.2%)
CTRC 5 (1.1%) MSH2 2 (0.2%)
NTHL1 9 (0.8%) NF1 2 (0.2%)
BRIP1 9 (0.8%) PMS2 2 (0.2%)
APC 9 (0.7%) VHL 2 (0.2%)
BRCA1 7 (0.6%) CDKN1C 1 (0.1%)
MSH6 7 (0.6%) EGFR 1 (0.1%)
PALB2 7 (0.6%) MITF 1 (0.1%)
NBN 6 (0.5%) RET 1 (0.1%)
WRN 5 (0.4%) MSH3 1 (0.1%)
CDKN2A (p16INK4a) 5 (0.4%) SDHB 1 (0.1%)
FANCC 4 (0.4%) RAD51C 1 (0.1%)
FH 4 (0.3%) CDKN2A (p14ARF) 1 (0.1%)
SDHA 4 (0.3%) MEN1 1 (0.1%)
RECQL4 3 (0.3%) MLH1 1 (0.1%)
CFTR Alteration Subtype Other nomenclature N (53) Minor Allele Frequency (MAF)a
B
c.1210–34 TG[11]T[5] 5T; TG11 24 0.033 (3.3% ie >1%)
c.1210–34 TG[12]T[5] 5T; TG12 8 <0.01 (<1%)
c.1210–34 TG[13]T[5] 5T; TG13 1 <0.01 (<1%)
NM_000492.3:c.1327G > T p.Asp443Tyr 1 <0.01 (<1%)
NM_000492.3:c.1521_1523del p.Phe508del; aka ΔF508 12 0.01 (1%)
NM_000492.3:c.1624G > T p.Gly542 2 <0.01 (<1%)
NM_000492.3:c.2657+5G > A Intronic 1 <0.01 (<1%)
NM_000492.3:c.3454G > C p.Asp1152His 2 <0.01 (<1%)
NM_000492.3:c.3846G > A p.Trp1282 1 <0.01 (<1%)
NM_000492.3:c.3909C > G p.Asn1303Lys 1 <0.01 (<1%)
a

Highest sub-population minor allele frequency as reported by gnomAD and 1000’s genome project.