Skip to main content
. 2024 Aug 12;22:756. doi: 10.1186/s12967-024-05567-z

Table 1.

Display of the functional phenotypic dataset sequence

Dataset Classification Numbers Length
(Multiclass/Binary) Sum Average Max

Dataset_HERV

(HERV)

HERV_Coding/HERV 16,556 22,643,342 1,368 125,188
HERV_Non-Coding/HERV 400,860 295,693,006 738 112,801
Non-HERV_Coding/ Non-HERV 18,994 23,490,411 1,237 83,426
Non-HERV_Non-Coding/ Non-HERV 343,913 251,939,874 733 93,893

Dataset_Immuno

(Immunogenetic)

Immuno_KIR/Immuno 1,723 3,096,500 1,797 39,269
Immuno_Others/Immuno 16,719 83,307,498 4,983 71,249
Non-Immuno 18,326 78,935,043 4,307 93,519

Dataset_Regulatory

(Regulatory)

TF_binding_site/Regulatory 22,860 13,391,832 586 93,893
Enhancer/Regulatory 320,389 335,938,843 1,049 93,893
CTCF_binding_site/Regulatory 94,738 52,273,466 552 93,893
Promoter/Regulatory 52,413 79,591,023 1,519 99,371
Open_chromatin_region/Regulatory 130,006 54,838,694 422 93,893
Non-Regulatory 494,389 435,738,664 881 96,745

Dataset_Diseases_GWAS

(GWAS_loci/PrimateAI-3D scores)

Diseases-GWAS_Coding/Diseases_GWAS 175,920 566,540,577 3,220 99,371
Diseases-GWAS_Non-Coding/Diseases_GWAS 51,427 132,677,910 2,580 92,731
Non_Diseases-GWAS_Coding/Non_Diseases_GWAS 148,235 550,157,564 3,711 93,893
Non_Diseases-GWAS_Non-Coding/Non_Diseases_GWAS 31,298 104,453,319 3,337 93,893

Dataset_Highly_Specifically_Gene

(Defensins/Olfactory Receptor)

Defensins/Highly_Specifically_Gene 415 418,877 1,009 9,191
Olfactory_Receptor/ Highly_Specifically_Gene 5,400 5,305,444 983 40,645
Others 5,610 6,653,032 1,186 94,155