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. 2024 Jul 17;13:441–494. doi: 10.3114/fuse.2024.13.12

Fig. 18.

Fig. 18

Multigene phylogeny of the Fusarium fujikuroi species complex based on RPB2, and tef1. Datasets were aligned using MAFFT v. 7.520 ( Katoh & Standley 2013) and a Maximum Likelihood (ML) tree was calculated in IQ-TREE v. 2.2.2.6 ( Minh et al. 2020). Best nucleotide substitution models were calculated with ModelFinder ( Kalyaanamoorthy et al. 2017) as implemented in IQ-TREE. Bayesian analysis was carried out in MrBayes v. 3.2.7a ( Ronquist et al. 2012), model selection according to MrModelTest v 2.3 ( Nylander 2004, Posada and Crandall 1998). The tree was rooted to Fusarium nirenbergiae CBS 744.97. Grey coloured boxes indicate biogeographic groups according to O’Donnell et al. (1998). Values at nodes are ML ultrafast bootstrap (BS) ≥ 95% followed by Bayesian posterior probability (PP) ≥ 0.95. Bold branches indicate BS = 100 and PP = 1. Fusarium proliferatum is shown in bold. (ET = ex-epitype, NT = ex-neotype T = ex-type). The tree is based on accession numbers as indicated in Yilmaz et al. (2021).