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. 2024 Jul 17;13:441–494. doi: 10.3114/fuse.2024.13.12

Fig. 22.

Fig. 22

Maximum Likelihood (ML) phylogeny of Hypomyces and allied genera based on the LSU nucleotide alignment. The dataset was aligned using MAFFT v. 7.520 ( Katoh & Standley 2013) and the ML tree was calculated in IQ-TREE v. 2.1.3 ( Minh et al. 2020). Best nucleotide substitution models were calculated with ModelFinder ( Kalyaanamoorthy et al. 2017) as implemented in IQ-TREE. The tree was rooted to Verticillium albo-atrum (CBS 130340, GenBank NG_066192). Values at nodes are ML ultrafast bootstrap ≥ 75 % (based on 10 000 replicates; values ≥ 95 % can be considered significant). The novel taxon is shown in bold and a dark blue block, and sequences from material with a type status are indicated with a bold culture or voucher number. Families, the order and the class are shown in coloured blocks on the right side of the phylogeny. The basal branch was shortened to facilitate layout.