Table 1. In Vitro Antiplasmodial Activity and Characteristics of PDIP Analogues.
Sequence change relative to peptide 3, with the full amino acid sequence shown in Table S1; ds, disulfide bond.
% helicity was determined from the lowest MRE between 218 and 222 nm for 50 μM peptide in 100 mM NaF, 10 mM KH2PO4, pH 7.5 (Figures 4A, 5A, 6A).
Relative peptide binding PCPS/PC was determined using P/L at the end of the association phase of 16 μM peptide bound to POPC/POPS (4:1) compared to POPC bilayers (Figure 4C, 5C, 6C).
% peptide remaining was determined from area under the curve of the [M + 4]4+ peak (intact mass) using TOF-MS. Peptide analogues (50 μM) were incubated in 25% (v/v) serum in PBS at 37 °C for 24 h and compared to 0 h controls (100% peptide).
Pf IC50, peptide concentration to inhibit 50% growth of P. falciparum 3D7 compared to untreated controls, as determined from dose–response curves (Figure S5). Growth inhibition was determined from DAPI staining of parasite nuclei after 72 h incubation at 37 °C, 5% CO2, 5% O2. Culture medium was supplemented with either 5% serum, 2.5 mg/mL Albumax II (Ser + Alb), or 5 mg/mL Albumax II (Alb).
Hemolysis HC10, peptide concentration that lyses 10% of uninfected RBCs, determined from dose–response curves for released hemoglobin (Figure S6). Less than 10% hemolysis was confirmed within the active concentration range for 3, 10, 12, 24, and 26 up to 72 h incubation.
Activity-hemolysis index comparing 50% inhibition of in vitroP. falciparum (5 mg/mL Albumax II supplement) to 10% hemolysis of uninfected RBCs. Values highlighted in bold indicate improvements over the respective scaffold peptides (1–3).