Table 1.
Primer sequences that were used in this study
| Genes | Sequences (5’–3’) | Annealing (°C) |
Product size (bp) | References |
|---|---|---|---|---|
| Putative integrase |
F- TCGCATTTCTCTCCCCACCACG R- CCGGATGTGTCTCGGGCAATC |
60 | 159 | [17] |
| qnrA |
F- CAGCAAGAGGATTTCTCACG R- AATCCGGCAGCACTATTACTC |
53 | 630 | [19] |
| qnrB |
F- GGCTGTCAGTTCTATGATCG R- GAGCAACGATGCCTGGTAG |
55 | 488 | [19] |
| qnrC |
F- GCAGAATTCAGGGGTGTGAT R- AACTGCTCCAAAAGCTGCTC |
55 | 118 | [19] |
| qnrD |
F- CGAGATCAATTTACGGGGAATA R- AACAAGCTGAAGCGCCTG |
54 | 581 | [19] |
| qnrS |
F- GCAAGTTCATTGAACAGGGT R- TCTAAACCGTCGAGTTCGGCG |
57 | 428 | [19] |
| oqxAB |
F- CCGCACCGATAAATTAGTCC R- GGCGAGGTTTTGATAGTGGA |
52 | 313 | [19] |
| aac(6’)-lb-cr |
F- TTGGAAGCGGGGACGGAM R- ACACGGCTGGACCATA |
57 | 260 | [19] |
| qepA |
F- GCAGGTCCAGCAGCGGGTAG R- CTTCCTGCCCGAGTATCGTG |
55 | 218 | [19] |
| qnrVC |
F- AATTTTAAGCGCTCAAACCTCCG R- TCCTGTTGCCACGAGCATATTTT |
55 | 521 | [20] |
| qnrE |
F- GGCATTGATTTTTGAAGGCGA R- GTGGGTAAAATTGGCCGCTC |
56 | 517 | [21] |
| crpP |
F- CGAGCTGCTGTTGCTGCTCCTGG R- CGACCGGTACCGACAAGCTGGAC |
63 | 177 | [22] |
| ERIC-PCR |
F- AAGTAAGTGACTGGGGTGAGCG R- ATGTAAGCTCCTGGGGATTCAC |
40 | Variable | [23] |