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. 2024 Aug 13;17:341. doi: 10.1186/s13071-024-06416-0

Table 1.

Primers and sequences used for COI and cytb conventional PCR, and real time RT-PCR methods

Primer Sequence (direction, target gene)
VF1d_t1 5′-TGTAAAACGACGGCCAGTTCTCAACCAACCACAARGAYATYGG-3′ (forward, vertebrate COI)
VR1d_dt 5′-CAGGAAACAGCTATGACTAGACTTCTGGGTGGCCRAARAAYCA-3′ (reverse, vertebrate COI)
L14841 5′-CCATCCAACATCTCAGCATGATG AAA-3′ (forward, vertebrate cytb)
H151494 5′-GCCCCTCAGAATGA TATTTGTCCTCA-3′ (reverse, vertebrate, cytb)
LCO1490 5′-GGTCAACAAATCATAAAGATATTGG-3′ (forward, mosquitoes COI)
HCO2198 5′-TAAACTTCAGGGTGACCAAAAAATCA-3′ (reverse, mosquitoes COI)
Sense 5′-AAAGGAACAATGGACTCTGGTCA-3′ (forward, mosquitoes G2)
Antisense 5′-CACTTCTTACTACCATGTCCTCCAAT-3′ (reverse, mosquitoes G2)
Probe 5′-AAAGCTTTGATATCTCTCAGTGCCCCAA-3′ (5′-nuclease probe)