Table 2.
Dilution | HDT | PCR | Significance by group* | ||||
---|---|---|---|---|---|---|---|
North seeking bacteria | South seeking bacteria | Total count of bacteria | [pos./neg.] [1,0] | MamQ [pos./neg.] [1,0] |
MamT [pos./neg.] [1,0] |
||
10–4 | N/A | N/A | ≥ 50 | 1 | 1 | 1 | |
10–4 | N/A | N/A | ≥ 50 | 1 | 1 | 1 | |
10–4 | 90% | 10% | ≥ 50 | 1 | 1 | 1 | |
10–4 | 90% | 10% | ≥ 50 | 1 | 1 | 1 | |
4/4 | 4/4 | 4/4 | P > 0.5 | ||||
10–5 | 40% | 60% | ≥ 50 | 1 | 1 | 1 | |
10–5 | 50% | 50% | ≥ 50 | 1 | 1 | 1 | |
10–5 | 90% | 10% | ≥ 50 | 1 | 1 | 1 | |
10–5 | 90% | 10% | ≥ 50 | 1 | 1 | 1 | |
4/4 | 4/4 | 4/4 | P > 0.5 | ||||
10–6 | 50% | 50% | ≥ 50 | 1 | 1 | 1 | |
10–6 | 50% | 50% | ≥ 50 | 1 | 1 | 1 | |
10–6 | 80% | 20% | ≥ 50 | 1 | 1 | 1 | |
10–6 | 70% | 30% | ≥ 50 | 1 | 1 | 1 | |
4/4 | 4/4 | 4/4 | P > 0.5 | ||||
10–7 | N/A | N/A | 4 | 1 | 0 | 0 | |
10–7 | N/A | N/A | 8 | 1 | 0 | 0 | |
10–7 | N/A | N/A | 35 | 1 | 1 | 1 | |
10–7 | N/A | N/A | 20 | 1 | 1 | 1 | |
10–7 | 17 | 22 | 39 | 1 | 0 | 0 | |
10–7 | 40 | 4 | 44 | 1 | 0 | 0 | |
6/6 | 2/6 | 2/6 | 0.0057 | ||||
10–8 | 3 | 3 | 6 | 1 | 0 | 0 | |
10–8 | 8 | 1 | 9 | 1 | 0 | 0 | |
10–8 | 3 | 0 | 3 | 1 | 1 | 1 | |
10–8 | 3 | 1 | 4 | 1 | 1 | 1 | |
4/4 | 2/4 | 2/4 | 0.0632 | ||||
10–9 | 1 | 0 | 7 | 1 | 0 | 0 | |
10–9 | 3 | 0 | 3 | 1 | 0 | 0 | |
10–9 | 3 | 1 | 4 | 1 | 0 | 0 | |
10–9 | 1 | 0 | 1 | 1 | 0 | 0 | |
4/4 | 0/4 | 0/4 | 0.0009 | ||||
10–10 | 0 | 0 | 0 | 0 | 0 | 0 | |
10–10 | 0 | 0 | 0 | 0 | 0 | 0 | |
10–10 | 0 | 0 | 0 | 0 | 0 | 0 | |
10–10 | 0 | 0 | 0 | 0 | 0 | 0 | |
0/4 | 0/4 | 0/4 | P > 0.5 |
At 10–9 fold dilutions, HDT can detect up to 1 single observable cell, whereas the PCR method is not able to detect the presence of the MTB. P values indicate the difference using a binomial distribution test with a logit link function. When examining the sensitivity difference in all these lower concentrations together, these differences are highly significant (X2 = 19.74, p < 0.0001). N/A refers to not being assessed.