Table 9.
Top 20 of 122 genes with description selectively expressed in rat lung (Lu) based on their abundance (n = 3).
| No. | Gene Name | Product (Description) | Last Ref.* | Median Organ | FPKM | p-value | q-value | Mean/total | |
|---|---|---|---|---|---|---|---|---|---|
| Mean | Total | ||||||||
| 1 | St8sia2 | ST8 alpha-N-acetyl-neuraminide alpha-2,8- sialyltransferase 2 | [129] | Il | 7.0 | 8.1 | 3.25E-07 | 6.25E-07 | 0.872 |
| 2 | Ly6l | Lymphocyte antigen 6 family member L | [130] | Br | 77.2 | 103.7 | 5.49E-08 | 5.61E-05 | 0.745 |
| 3 | Icam1 | Intercellular adhesion molecule 1 | [131] | Il | 242.5 | 329.3 | 1.12E-06 | 7.80E-05 | 0.736 |
| 4 | LOC102546678 | Proline-rich Gla (G-carboxyglutamic acid) 3 (transmembrane) | - | Il | 18.0 | 20.5 | 1.97E-07 | 1.37E-04 | 0.879 |
| 5 | LOC102554838 | Stathmin domain-containing protein 1-like | - | Co | 6.2 | 8.6 | 2.53E-07 | 2.02E-04 | 0.726 |
| 6 | Thbd | Thrombomodulin | [132] | Il | 297.8 | 387.8 | 1.70E-06 | 2.35E-04 | 0.768 |
| 7 | Matn4 | Matrilin 4 | [133] | Ad | 36.4 | 46.0 | 2.30E-06 | 3.47E-04 | 0.791 |
| 8 | LOC681341 | Similar to paired immunoglobin-like type 2 receptor β | - | Co | 11.6 | 15.8 | 2.74E-06 | 3.79E-04 | 0.733 |
| 9 | Prrg3 | Proline-rich Gla (G-carboxyglutamic acid) 3 (transmembrane) | - | Co | 17.5 | 19.4 | 1.66E-06 | 5.23E-04 | 0.903 |
| 10 | Lhb | Luteinizing hormone beta polypeptide | [134] | Ki | 10.3 | 13.9 | 9.59E-06 | 5.31E-04 | 0.746 |
| 11 | Acvrl1 | Activin A receptor type II-like 1 | [135] | Ki | 238.0 | 336.0 | 2.12E-06 | 5.85E-04 | 0.708 |
| 12 | Pifo | Primary cilia formation | [136] | Ad | 6.3 | 7.9 | 2.64E-06 | 6.65E-04 | 0.803 |
| 13 | Scgb1a1 | Secretoglobin, family 1A, member 1 (uteroglobin) | [137] | Ad | 21465.0 | 21576.2 | 3.55E-06 | 7.70E-04 | 0.995 |
| 14 | Fhad1 | Forkhead-associated (FHA) phosphopeptide binding domain 1 | - | Ki | 9.2 | 10.7 | 5.42E-06 | 7.71E-04 | 0.854 |
| 15 | Nme9 | NME/NM23 family member 9 | - | Ad | 9.0 | 10.4 | 3.60E-06 | 7.76E-04 | 0.868 |
| 16 | RGD1561648 | RGD1561648 | - | Co | 7.6 | 10.6 | 9.11E-06 | 8.24E-04 | 0.718 |
| 17 | LOC108348266 | Cytochrome P450, family 2, subfamily b, polypeptide 1 | - | Br | 528.5 | 702.5 | 6.04E-06 | 1.00E-03 | 0.752 |
| 18 | Dram1 | DNA-damage regulated autophagy modulator 1 | [138] | Ad | 133.1 | 177.1 | 1.04E-05 | 1.04E-03 | 0.752 |
| 19 | Limch1 | LIM and calponin homology domains 1 | [139] | St | 174.7 | 216.9 | 8.99E-06 | 1.17E-03 | 0.805 |
| 20 | LOC680885 | Hypothetical protein LOC680885 | - | Ad | 14.2 | 15.3 | 1.09E-05 | 1.35E-03 | 0.928 |
Note: Sorted by q-value. Ad, adrenal gland; Br, brain; Co, colon; Il, ileum; Ki, kidney; St, stomach.
* Last Ref. was based on the reports documented in PubMed (www.pubmed.gov) before June 10, 2023.