Table 2.
Dsm2b Brain expressed candidate genes
| Gene | NCBI gene ID | Location (GRCm39) | Expression difference | Coding difference (most severe consequence)* | Prior association with seizures and/or epilepsy |
|---|---|---|---|---|---|
| Myod1 | 17927 | 7:46025898–46028523 |
rs13472312 (m) rs13472315 (m) rs32790785 (m) |
||
| Kcnc1 | 16502 | 7:46045921–46088128 | Yes | ||
| Sergef | 27414 | 7:46092578–46289231 | Yes |
rs31674298 (m) rs32795453 (m) |
|
| Tph1 | 21990 | 7:46294065–46321961 | |||
| Saal1 | 78935 | 7:46335532–46360104 | |||
| Saa3 | 20210 | 7:46361422–46365124 | Yes | ||
| Hps5 | 246694 | 7:46409890–46445488 | |||
| Gtf2h1 | 14884 | 7:46445527–46473224 | |||
| Ldha | 16828 | 7:46490899–46505051 | Yes | Yes | |
| Ldhc | 16833 | 7:46510627–46527566 | |||
| Tsg101 | 22088 | 7:46538697–46569717 | |||
| Uevld | 54122 | 7:46572964–46608275 | |||
| Misfa | 629141 | 7:46633328–46637551 | |||
| Spty2d1 | 101685 | 7:46640144–46658159 | |||
| Tmem86a | 67893 | 7:46700349–46704525 | |||
| Ptpn5 | 19259 | 7:46727543–46783432 | Yes | Yes | |
| Zdhhc13 | 243983 | 7:48438751–48477188 | |||
| Csrp3 | 13009 | 7:48480146–48497781 | |||
| E2f8 | 108961 | 7:48516177–48531344 | |||
| Nav2 | 78286 | 7:48558464–49259838 | Yes |
rs250301556 (ins) rs31226051 (m) rs248206089 (m) rs32337268 (m) |
Yes |
| Dbx1 | 13172 | 7:49281247–49286597 | rs246161289 (del) | Yes | |
| Htatip2 | 53415 | 7:49408863–49423723 | |||
| Prmt3 | 71974 | 7:49428094–49508013 | rs32892158 (m) | Yes | |
| Slc6a5 | 104245 | 7:49559894–49613604 | rs31048165 (m) | Yes | |
| Nell1 | 338352 | 7:49624612–50516356 | Yes | ||
| 4933405O20Rik | 243996 | 7:50248938–50250278 | |||
| Ano5 | 233246 | 7:51160777–51248457 | Yes | ||
| Slc17a6 | 140919 | 7:51271754–51320867 | Yes | ||
| Fancf | 100040608 | 7:51510325–51512015 | |||
| Gas2 | 14453 | 7:51511763–51644723 | |||
| Svip | 75744 | 7:51646919–51655766 | |||
| Ccdc179 | 100503036 | 7:51661431–51665476 |
*m, missense; ins, in-frame insertion; del, in-frame deletion