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. 2024 Aug 16;15:7068. doi: 10.1038/s41467-024-51133-y

Table 3.

Rate constants and kinetic parameters for the reaction of KYN with HsKYNase_93D9 and HsKYNase_66 derived by the global fitting of the experimental data (Fig. 2a, d) to the kinetic models shown in Fig. 2b and e

Rate constant and kinetic parameter HsKYNase_93D9 HsKYNase_66
Best fit 95% Confidence interval Best fit 95% Confidence interval
k1 0.24 μM−1s−1 (0.22, 0.27) 5.9 μM−1s−1 (5.5, 6.4)
k−1 4 s−1 (3.31, 4.83) 268 s−1 Locked
k2 0.79 s−1 0.77, 0.81) 3.1 s−1 (2.78, 3.28)
k−2 a0.34s−1 Locked 19s−1 Locked
k3 11.5s−1 Locked 21 s−1 (17.5, 24.8)
k−3 0.001μM−1s−1 Locked 0.001μM−1s−1 Locked
k4 11s−1 Locked 1.5s−1 Locked
k−4 0.02μM−1s−1 Locked 0.001μM−1s−1 Locked
kcat (s−1) 0.68 - 0.75 -
KM (μM) 17.5 - 21.1 -
kcat/KM (M−1s−1) 3.9 × 104 - 3.6 × 104 -

aRate constants shown in bold font were locked at the displayed value corresponding to either their lower or upper limit during the global fitting process.

Rate constants that were allowed to float during the global data fitting (shown in green font in Fig. 2b and e) are summarized with confidence intervals by contour analysis. Using Eqs. 3, 4 and 5 (Methods) and the rate constants from the pre-steady-state analysis that are listed above, the steady-state kinetic parameters kcat, KM and kcat/KM were estimated respectively.