Table 2.
SNV | Chr | Position | Ref | Alt | AF (Alt) | β (Alt) | P | Gene | eQTL/sQTL |
---|---|---|---|---|---|---|---|---|---|
Genome-Wide Significance (P < 5 × 10−8) | |||||||||
rs62057121 | 17 | 45823394 | G | A | 0.15 | -1.32 | 7.45 × 10–78 | MAPT | LRRC37A4Pc* |
rs4420638 | 19 | 44919689 | A | G | 0.20 | -0.57 | 2.91 × 10–19 | APOE | TOMM40b |
rs7412 | 19 | 44908822 | C | T | 0.06 | 0.87 | 9.57 × 10–16 | APOE | |
rs11708828 | 3 | 39458158 | C | T | 0.46 | -0.35 | 7.04 × 10–12 | MOBP | PRSAc |
rs10753232 | 1 | 180980990 | C | T | 0.44 | 0.31 | 6.79 × 10–10 | STX6 | STX6a* |
Loci of Potential Interest (P < 1 × 10−6) | |||||||||
rs56251816 | 19 | 17750888 | A | G | 0.22 | 0.35 | 6.57 × 10–08 | FCHO1/MAP1S | |
rs12817984 | 12 | 53410523 | T | G | 0.16 | -0.37 | 8.91 × 10–08 | SP1 | SP1a* |
rs4712314 | 6 | 17833813 | G | T | 0.51 | 0.27 | 2.37 × 10–07 | KIF13A | |
rs74651308 | 12 | 21323155 | G | A | 0.07 | 0.51 | 2.86 × 10–07 | SLCO1A2 | |
rs111593852 | 7 | 138449166 | C | T | 0.02 | 0.87 | 3.75 × 10–07 | TRIM24 | |
rs367364 | 6 | 32052169 | C | T | 0.13 | -0.37 | 7.07 × 10–07 | TNXB | CYP21A1Pc* |
rs839764 | 1 | 43367703 | T | A | 0.41 | 0.27 | 7.94 × 10–07 | ELOVL1 | TIE1a* |
rs12026659 | 1 | 221976623 | G | A | 0.21 | 0.31 | 9.48 × 10–07 | DUSP10 |
Chr Chromosome, Ref Reference allele, Alt Alternative allele, AF Allele frequency
*Represents the SNV regulates multiple genes, and the gene with the smallest P-value was shown here (eQTL/sQTL for the brain region was obtained through GTEx)
aSNVs with significant eQTL hits
bSNVs with significant sQTL hits
cSNVs with both eQTL and sQTL hits