Table 2. Contribution of Y84 and Y105 to POPC-STARD2 Binding Free Energy from FEP Calculationsa.
| Mutation | Forward (kcal/mol) | Backward (kcal/mol) | BAR (kcal/mol) | ΔΔGbinding (kcal/mol) | |
|---|---|---|---|---|---|
| Y84A | PC | 12.38 | –11.29 | 11.98 ± 0.12 | 1.81 |
| noPC | 10.43 | –9.62 | 10.17 ± 0.08 | ||
| Y105A | PC | 14.89 | –12.15 | 13.34 ± 0.18 | 2.54 |
| noPC | 9.96 | –11.72 | 10.79 ± 0.08 |
Transformation of each tyrosine to alanine in the absence and presence of POPC from forward and backward simulations and the corresponding BAR estimate.