TABLE 2.
Computed variations for all 109 samples showing the combined number of substitutions, insertions, and deletions per coding regiona
| Gene | Total number of variations | Number of non-synonymous variations | Non-synonymous/ total variations |
|---|---|---|---|
| NS1 | 178 | 15 | 0.084 |
| NS2 | 190 | 6 | 0.032 |
| N | 493 | 15 | 0.030 |
| P | 220 | 56 | 0.255 |
| M | 376 | 73 | 0.194 |
| SH | 120 | 24 | 0.200 |
| G | 1,348 | 743 | 0.551 |
| F | 749 | 107 | 0.143 |
| M2-1 | 219 | 27 | 0.123 |
| M2-2 | 145 | 86 | 0.593 |
| L | 2,776 | 486 | 0.175 |
Total variations were deduced from the nucleotide sequence alignment, and non-synonymous variations were deduced from the amino acid alignment.