Table 1.
Summary of the probe selection criteria for the robust, intermediate, and combined cohorts
| Robust episignature | Intermediate episignature | Combined episignature | |
|---|---|---|---|
| Number of cases | 23 | 23 | 40 |
| Number of controls | 46 | 69 | 80 |
| 900 | 800 | 800 | |
| 450 | 400 | 400 | |
| 0.7 | 0.6 | 0.95 | |
| Number of selected probes | 271 | 255 | 377 |
| Model’s specificity | 99.16% | 98.76% | 98.32% |
: the number of probes with the highest products of mean methylation difference and negative of the logarithm of p values selected in the first step of probe selection; : the number of probes with the highest AUC selected in the second step of probe selection; : the cut-off for removing the highly correlated probes in the third step of probe selection.