Table 1.
Sample ID | Primary tumor entity | DNA variants detected in BM tissue samples | DNA variants detected in BM-derived short-term cultures |
---|---|---|---|
BM28 | NSCLC |
STK11 c.289_290 + 2delAAGT (AF = 59.6%) TP53 c.734G > T:p.G245V (AF = 69.8%) |
STK11 c.289_290 + 2delAAGT (AF = 90.5%) TP53 c.734G > T:p.G245V (AF = 92.5%) |
BM31 | Melanoma |
KIT c.2447 A > T:p.D816V (AF = 29.5%) JAK3 c.2164G > A:p.V722I (AF = 50.1%) |
KIT c.2447 A > T:p.D816V (AF = 31.7%) JAK3 c.2164G > A:p.V722I (AF = 51.0%) |
BM32 | GC | ATM c.2572T > C:p.F858L (AF = 40.8%) | ATM c.2572T > C:p.F858L (AF = 44.3%) |
BM35 | NSCLC |
FGFR3 c.1345 C > T:p.P449S (AF = 49.1%) KRAS c.34G > T:p.G12C (AF = 50.9%) |
FGFR3 c.1345 C > T:p.P449S (AF = 52.6%) KRAS c.34G > T:p.G12C (AF = 62.8%) |
BM36 | ESCA | JAK3 c.2152G > C:p.V718L (1st BM: AF = 31.6%; 2nd BM: AF = 36.5%) | JAK3 c.2152G > C:p.V718L (AF = 47.5%) |
Abbreviations: NSCLC, non-small cell lung cancer; GC, gastric cancer; ESCA: esophageal carcinoma; AF, mutant allele frequency; BM, brain metastasis