Table 6.

Bio-ontologies that can be exploited for the characterization of data sources (Part I).

Type	Data source	GO	Mondo	HPO	VO	ChEBI	Uberon	CLO	PRO	SO	PW
miRNA	miRBase	x								x
	miRDB									x
	miRNet		x	x		x			x	x
	miRecords									x
	EpimiR									x
	HMDD		x	x						x
	miR2Disease		x	x						x
	TargetScan									x
	SomamiR		x	x						x
	TarBase									x
	miRTarBase									x
	SM2miR					x				x
	TransmiR								x	x
	PolymiRTS		x	x						x
	dbDEMC		x	x						x
	TAM	x	x	x			x		x	x
	PuTmiR								x	x
	miRPathDB	x								x	x
	miRCancer		x	x						x
	miRdSNP		x	x						x
	miRandola	x				x				x
mRNA vaccine	DrugBank		x		x	x				x
s(i/h)RNA	ICBP siRNA									x
	DrugBank		x			x				x
RNA aptamer	Apta-Index					x			x	x
	DrugBank		x			x			x	x
ASO	eSkip-Finder									x
	DrugBank		x			x			x	x
gRNA	Addgene									x
lncRNA	LncBook	x	x	x			x	x	x	x
	LncRNADisease		x	x						x
	LncExpDB									x
	dbEssLnc	x				x				x
	lncATLAS	x								x
	NONCODE		x	x						x
	Lnc2Cancer		x	x						x
	LncRNAWiki	x	x			x			x	x	x
	LncBase	x					x	x		x
	TANRIC		x							x