Table 1.
Gene | Enzyme name | Butyrate Synthesis Pathway |
2mo vs. 12mo |
2mo vs. 18mo |
12mo vs. 18mo |
18mo vs. 18mo+TB |
||||
---|---|---|---|---|---|---|---|---|---|---|
Trend | p-value | Trend | p-value | Trend | p-value | Trend | p-value | |||
puuE or GABA-T | 4-aminobutyrate transaminase | 4-Aminobutyrate | ↓ | n.s. | ↓ | 0.023 | ↓ | n.s. | ↑ | n.s. |
4Hbt, cat2, or abfT | butyryl-CoA:4-hydroxybutyrate CoA transferase | Acetyl-CoA | ↓ | 0.055 | ↓ | 0.052 | ↓ | n.s. | ↑ | 0.070 |
phbB | acetoacetyl-CoA reductase | Acetyl-CoA | ↓ | n.s. | ↓ | n.s. | ↓ | 0.012 | ↑ | 0.049 |
atoB | thiolase | Acetyl-CoA | ↓ | 0.039 | ↓ | 0.032 | ↓ | n.s. | ↑ | n.s. |
ptb | phosphate butyryltransferase | Acetyl-CoA | ↓ | n.s. | ↓ | 0.051 | ↓ | n.s. | ↑ | n.s. |
buk | butyrate kinase | Acetyl-CoA | ↓ | 0.062 | ↓ | 0.037 | ↓ | n.s. | ↑ | n.s. |
crt | crotonase | Acetyl-CoA | ↓ | 0.045 | ↓ | 0.039 | ↓ | n.s. | ↑ | 0.061 |
gctA | glutaconate CoA transferase α | Glutarate | ↓ | 0.041 | ↓ | 0.042 | ↓ | n.s. | ↑ | n.s. |
gctB | glutaconate CoA transferase β | Glutarate | ↓ | 0.037 | ↓ | 0.038 | ↓ | n.s. | ↑ | n.s. |
kamA | lysine-2.3-aminomutase | Lysine | ↓ | 0.049 | ↓ | 0.031 | ↓ | n.s. | ↑ | n.s. |
bcd | butyrate-CoA dehydrogenase (including electron transfer protein α, β subunits) | Common to all | ↓ | 0.047 | ↓ | 0.039 | ↓ | n.s. | ↑ | n.s. |
estA | esterase | putative tributyrin esterase | ↓ | 0.036 | ↓ | 0.024 | ↓ | n.s. | ↑ | 0.030 |
Results from Kruskal–Wallis test comparing the abundance of butyrate synthesizing genes in cecal samples of 3×Tg mice at 2, 12 and 18 months of age. TB: tributyrin; n.s.: no significance. Enzyme abbreviations defined in legend for Figure 3.