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. 2005 Jan 7;385(Pt 2):381–388. doi: 10.1042/BJ20040844

Table 2. N-terminal amino acid sequence residues of bovine decorin and biglycan derived from fresh ligament tissue and culture medium.

Deglycosylated core protein peptides from ligament explant cultures were resolved on 4–15% gradient polyacrylamide/SDS gels and electro-eluted on to PVDF sequencing membranes. The bands were cut out and subjected to N-terminal amino acid sequencing. The approx. Mr values of peptides with the corresponding yield of the first amino acid in the peptide sequence respectively are shown. ‘X’ in the amino acid sequences represents an unidentified amino acid residue.

Fresh tissue matrix peptides Culture medium peptides
Approx. Mr (×10−3) Residues Yield (pmol) Approx. Mr (×10−3) Residues Yield (pmol) Origin of peptide sequence
43 DEAXGIGP 500 43 DEASGIGP 115 D1EASGIGP*
32 DEAXGIGP 27 32 DEAXGIGP 5
30 DEAXGIGP 12 30 DEAXGIGP 11
21 DEAXGIGP 42 21 DEAXGIGP 16
18 DEAXGIGP 51 18 DEAXGIGP 119
13 DEAXGIGP 20 13 DEAXGIGP 13
40 DEEAXGAE 22 D1EEASGAE

* Peptide sequence is based on the primary sequence of bovine decorin [36].

† Peptide sequence is based on the primary sequence of bovine biglycan [36].