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. 2024 Aug 26;14:19750. doi: 10.1038/s41598-024-70540-1

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© The Author(s) 2024

Open Access This article is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License, which permits any non-commercial use, sharing, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if you modified the licensed material. You do not have permission under this licence to share adapted material derived from this article or parts of it. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by-nc-nd/4.0/.

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Fig. 1 — Genetic diversity and timeline of collection of 154 ESBL-producing ST131 E. coli isolates. (A) The maximum likelihood phylogeny was constructed with RAxML from 18,734 core genome single nucleotide polymorphisms (SNPs). Background shading of each isolate indicates the ST131 clade (A, B), subclade (C2, C2), or subgroup (C2a). fimH allele type, multi-locus sequence type (ST), source, and date of isolation are shown for each isolate. (B) Total number of ST131 isolates collected each year colored by ST131 subclade.