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. 2024 Aug 26;25:76. doi: 10.1186/s12863-024-01259-1

Table 1.

Details on the PALgene family include information on 11 non-redundant genes identified in the cucumber genome. II: instability index, pl: isoelectric point, GRAVY: Grand Average of Hydropathy, pep: peptide, mw: Molecular Weight, Da: Dalton

Rename Phytozome GenPept CuGenDBv2 PAC no. Scaffold Start End Position CDS Pep Mw (Da) pI II GRAVY
CSPAL1 Cucsa.124,450 XP_004143255.1 CsaV3_6G039660.1 16,961,714 6 scaffold01001 389,195 392,389 F 2145 714 78033.18 6.37 35.95 -0.182
CSPAL2 Cucsa.124,460 XP_031743814.1 CsaV3_6G039670.1 16,961,715 6 scaffold01001 398,860 401,204 F 2139 712 77793.65 5.8 35.29 -0.194
CSPAL3 Cucsa.124,470 XP_011657651.2 CsaV3_6G039680.1 16,961,716 6 scaffold01001 404,132 406,259 F 2127 708 77546.46 5.76 35.51 -0.177
CSPAL4 Cucsa.124,480 XP_004143258.1 CsaV3_6G039690.1 16,961,717 6 scaffold01001 408,087 410,360 R 2142 713 78054.03 6.15 36.57 -0.191
CSPAL5 Cucsa.124,490 XP_004143356.3 CsaV3_6G039700.1 16,961,718 6 scaffold01001 412,913 415,097 R 2154 717 78235.39 6.18 32.54 -0.146
CSPAL6 Cucsa.124,500 XP_031744164.1 CsaV3_6G039710.1 16,961,719 6 scaffold01001 417,206 419,324 R 2118 705 77236.4 6.12 37.04 -0.152
CSPAL7 Cucsa.124,510 XP_004143260.2 CsaV3_6G039720.1 16,961,720 6 scaffold01001 421,196 423,314 R 2118 705 77172.26 5.96 34.25 -0.085
CSPAL8 Cucsa.137,590 XP_004149916.1 CsaV3_6G036550.1 16,963,222 6 scaffold01053 349,339 352,789 R 2142 713 78413.3 6.26 38.61 -0.229
CSPAL9 Cucsa.155,520 XP_004144018.1 CsaV3_1G040750.1 16,964,812 1 scaffold01136 265,075 267,105 R 2030 675 74044.82 5.37 35.48 -0.091
CSPAL10 Cucsa.350,120 XP_004152155.3 CsaV3_4G002330.1 16,979,871 4 scaffold03490 26 540 R 514 171 17846.26 7.96 23.94 0.035
CSPAL11 Cucsa.385,970 XP_031739733.1 CsaV3_6G014060.1 16,982,658 4 scaffold03904 1,153,049 1,157,200 R 2142 713 77640.7 6.23 28.22 -0.177