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. 2005 Mar 22;387(Pt 1):119–127. doi: 10.1042/BJ20040903

Table 4. Number of AUG triplets and secondary-structure free energy for NAT1 5′-UTR sequences.

uAUG*
Variant Length Strong Adequate Weak Free energy (kcal/mol)
Type IIA 166 1 −47.2
Type IIB 284 2 2 −80.5
Type IID 550 1 4 −167.7
Type IIE 700 2 2 6 −215.6

* The context of the uAUG was defined according to Meijer and Thomas [30] as ‘strong’ if it contained both an A, or G, at −3 and a G at +4, ‘adequate’ if it contained either of these nucleotides, and ‘weak’ if it contained neither.

† Calculated by the method of Mathews et al. [31] using the RNAstructure software. 1 kcal=4.184 kJ.