TABLE 2.
Details of the molecular descriptor and fingerprint sets.
| Type | Descriptor/Fingerprint Set | Bits |
|---|---|---|
| Molecular descriptors | MOE | 209 |
| DS | 440 | |
| RDKit | 208 | |
| Molecular fingerprints | CDK fingerprint (FP) | 1,024 |
| CDK extended fingerprint (ExtFP) | 1,024 | |
| CDK graph only fingerprint (GraphFP) | 1,024 | |
| Estate fingerprint (EstateFP) | 79 | |
| MACCS fingerprint (MACCSFP) | 166 | |
| Pubchem fingerprint (PubchemFP) | 881 | |
| Substructure fingerprint (SubFP) | 307 | |
| Substructure fingerprint count (SubFPC) | 307 | |
| Klekota-Roth fingerprint (KRFP) | 4,860 | |
| Klekota-Roth fingerprint count (KRFPC) | 4,860 | |
| Atom Pairs 2D fingerprint (AP2DFP) | 780 | |
| Atom Pairs 2D fingerprint count (AP2DFPC) | 780 |