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. 2024 Jun 2;75(16):5146–5161. doi: 10.1093/jxb/erae254

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© The Author(s) 2024. Published by Oxford University Press on behalf of the Society for Experimental Biology.

This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact reprints@oup.com for reprints and translation rights for reprints. All other permissions can be obtained through our RightsLink service via the Permissions link on the article page on our site—for further information please contact journals.permissions@oup.com.

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Fig. 4. — COM treatment induces a transcriptional reprogramming consistent with activation of PTI. (A) Volcano plot representing the statistically significant (adjusted P-value <0.05) differentially expressed genes (log2 fold change ≤ –1 or ≥1), in Arabidopsis Col-0 plants upon treatment with COM for 30 min (479 up-regulated genes and 49 down-regulated genes). (B) GO term enrichment analysis of the genes that showed up-regulation upon treatment with COM for 30 min. (C) Comparison of genes induced by treatment of COM with those induced by seven other elicitors of PTI. The total number of induced genes (IGs) for each elicitor (over all time points in Bjornson et al. 2021) is presented and the numbers of genes induced by all treatments or solely by COM are highlighted. (D) Correlation plot depicting changes in gene expression between all the elicitors evaluated in the comparative analysis: all transcriptomes compared at 30 min post-treatment.