Table 2. Primers used to clone promoter constructs.
The KpnI sites in the forward primers and the NheI sites in the reverse primers are underlined. The position of the primers is in relation to the AUG initiation codon in the ZAN/U strain.
| Primer name | Sequence (5′→3′) | Position | Construct name |
|---|---|---|---|
| PG3F1 | GGACAGGTACCGGTTGGATGGGATTTTTCTTCGCG | −1303/−1269 | PGZa3-1; PGKi3-1 |
| PG3F2 | CAAGGGTACCATTTCACAGCGATCGTG | −1215/−1189 | PGZa3-2; PGKi3-2 |
| PG3F3 | CGGACGGTACCCATATTTACCTCAATTCACC | −1050/−1021 | PGZa3-3; PGKi3-3 |
| PG3F4 | GCTCAGGTACCTAAACAATCGATAATTAAACTGC | −1007/−974 | PGZa3-4; PGKi3-4 |
| PG3F5 | GCTCGGTACCTGCGTAAGACTTTGTAGC | −671/−644 | PGZa3-5; PGKi3-5 |
| PG3F6 | CAATGGGTACCGAGCGATCGACTCTGAACAC | −339/−309 | PGZa3-6; PGKi3-6 |
| PG3R | GTGCCATGCTAGCTCGTTGTTGTTGTTGTTGATG | −27/+7 | |
| PG12F1 | GTAACAGGTACCTGCTATTCGCGGTTGTTAAC | −356/−325 | PGZa12-1; PGKi12-1 |
| PG12F2 | GTGTAGGTACCAAAGCACCTAGTAACG | −312/−286 | PGZa12-2; PGKi12-2 |
| PGZa12F6 | GTGTAGGTACCAAAGCACCTAGTAACGTTTTTCTTGTGCATAAAAAACAGGAATTCG | −312/−256 | PGKiMu |
| PGki12F6 | GTGTAGGTACCAAAGCACCTAGTAACGTTTTTCTTGTGCATAAAAAAAACAGGAATTCG | −312/−256 | PGZaMu |
| PG12F3 | CAGGGGTACCCTTCTGCTTTTATGTTGCAGTACG | −265/−232 | PGZa12-3; PGKi12-3 |
| PG12F4 | GAACCGGTACCAGTATGAAATAAATTCGCCG | −229/−199 | PGZa12-4; PGZa12-4 |
| PG12R2 | CAAGAGCTAGCCCCCGAACTGATGATTGGCTGTG | −79/−46 | PGZa12-5,12-6; PGKi12-5,12-6 |
| PG12R | GGACATGCTAGCAGCGAACTAAAAACTGGATGG | −27/+6 | |
| PG71F | CTGCTGGGTACCATCGCTCAGCCTGAAACGCG | −766/−735 | |
| PG71R | GGCATGCTAGCGACTGGGGGTTTCGTCTACG | −26/+5 | |
| PG17F | CTGCTGGCTAGCATCGCTCAGCCTGAAACGCG | −766/−735 | |
| PG17R | GGCATGGTACCGACTGGGGGTTTCGTCTACG | −26/+5 | |
| PG45F | GTGAACGGTACCTGGTTGAGTGAACGCTTCAAGC | −304/−271 | |
| PG45R | CGTTGCGCTAGCTCCGTCGTGATGAGCGGTTCAAG | −26/+9 |