Table 1.
Variants in SUPT5H (NM_001111020.3). * Delta score [0–1.0] generated by SpliceAI # GnomAD v4.0.0.
Nr. | HGVS Annotation | Molecular Effect | In Silico Prediction * | Description | Etnic Origin | GnomAD Allele Frequency # | Reference |
---|---|---|---|---|---|---|---|
1 | c.142G>T | p.Glu48* | nonsense | Chinese | [4] | ||
2 | c.193C>T | p.Arg65* | nonsense | Chinese | 7.15 × 10−7 | [15] | |
3 | c.397C>T | p.Arg133* | nonsense | Chinese | 3.05 × 10−6 | [17] | |
4 | c.458+1G>A | 1.00 | Donor loss | Dutch | [3] | ||
5 | c.631C>T | p.Gln211* | nonsense | Chinese | [4] | ||
6 | c.817delC | p.Leu273* | nonsense | French | [3] | ||
7 | c.1195C>T | p.Gln399* | nonsense | Chinese | [16] | ||
8 | c.1374+2T>C | 0.71 | Donor loss | Greek | [3] | ||
9 | c.1405delA | p.Arg469Glufs*10 | Frameshift | Chinese | [4] | ||
10 | c.1741_1744dupAACC | p.Arg582Glnfs*21 | Frameshift | Greek | [3] | ||
11 | c.1782_1785delCCAT | p.Ile594Metfs*2 | Frameshift | Chinese? | [3] | ||
12 | c.1789A>T | p.Leu597* | nonsense | ? | [11] | ||
13 | c.1855C>T | p.Arg619* | nonsense | ? | [4] | ||
14 | c.1901dupG | p.Met635Hisfs*19 | Frameshift | Chinese | [4] | ||
15 | c.1979delG | p.Gly660Valfs*6 | Frameshift | Dutch | [3] | ||
16 | c.1993_1994delTA | p.Met665Glufs*19 | Frameshift | ? | [11] | ||
17 | c.2245C>T | p.Arg749Trp | 0.69 | Donor gain | ? | 2.40 × 10−6 | [11] |
18 | c.2247delG | p.Leu750Serfs*11 | Frameshift | ? | [11] | ||
19 | c.2259-3C>A | 0.09 | - | Dutch | [3] | ||
20 | c.2368C>T | p.Gln790* | nonsense | French | [10] | ||
21 | c.2507A>G | p.Tyr836Cys | Alternative splicing | ? | [11] | ||
22 | c.2725delC | p.Gln909Argfs*45 | Frameshift | Dutch | [3] | ||
23 | c.2823_2850dup | p.Ser951* | nonsense | Chinese | [4] | ||
24 | c.3032_3033delTG | p.Met1011Metfs*9 | Frameshift | Chinese | [17] | ||
25 | c.3034T>A | p.Cys1012Ser | 0.02 | - | ? | [11] | |
26 | EXON 21 -2 A>G | Splice acceptor | ? | [11] | |||
27 | p.Glu455Aspfs*23 | Frameshift | ? | [11] | |||
28 | del(chr19:39936531-40030719) | ? | Chinese | [4] |