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. 2024 Aug 11;14(8):851. doi: 10.3390/jpm14080851

Table 2.

Success rate (SR) of RNA-seq tested samples based on pre-analytical variables.

Site SR
T 39/73 (53.4%)
N 4/11 (36.4%)
M Bone 2/4 (50%) 11/18 (61.1%)
Extraskeletal 9/14 (64%)
Sample type
Cell block 0/5 (0%)
Biopsy US-guided 11/17 (64.7%) 35/58 (60.3%)
EBUS/EUS 10/16 (62.5%)
Thoracoscopic 5/9 (55.5%)
CT-guided 6/12 (50%)
Surgical specimen Lobectomy 5/17 (29.4%) 19/39 (48.7%)
Wedge resection 10/15 (66.6%)
Metastasectomy 4/7 (57.1%)
Fragmentation
index
≥0.14 42/55 (76.4%)
<0.14 12/47 (25.5%)
Storage time (days)
≤30 22/33 (66.6%)
>30 32/69 (46.4%)