Table 2.
Viruses discovered from the transcriptome sequencing of potato leafhoppers collected from four Midwestern states in the United States.
| Viruses | Accession Number | Family | Longest Contig | Best Match (Accession Number) | % aa Identity | % Coverage |
|---|---|---|---|---|---|---|
| Plant viruses | ||||||
| Barley yellow dwarf virus-PAV | PP946271 | Solemoviridae | 467 | Barley yellow dwarf virus-PAV (NC_004750.1) | 97.9 | 8.2 |
| Clover yellow mosaic virus | PP946262 | Alphaflexiviridae | 276 | Clover yellow mosaic virus (NC_001753.1) | 73.2 | 3.9 |
| Lucerne transient streak virus | PP946263 | Solemoviridae | 2953 | Lucerne transient streak virus (NC_001696.2) | 97.5 | 69.0 |
| Peanut stunt virus RNA1 | PP946264 | Bromoviridae | 447 | Peanut stunt virus RNA1 (NC_002038.1) | 96.6 | 13.3 |
| Red clover vein mosaic virus | PP946265 | Betaflexiviridae | 1010 | Red clover vein mosaic virus (NC_012210.1) | 96.8 | 11.7 |
| Red clover necrotic mosaic virus RNA1 | PP946270 | Tombusviridae | 3851 | Red clover necrotic mosaic virus RNA1 (NC_003756.1) | 92.9 | 99.0 |
| Soybean carlavirus 1 | PP946266 | Betaflexiviridae | 8223 | Soybean carlavirus 1 (MW349427.1) | 96.0 | 95.1 |
| Turnip vein-clearing virus | PP946267 | Virgaviridae | 1961 | Turnip vein-clearing virus (NC_001873.1) | 99.4 | 31.1 |
| White clover mosaic virus | PP946268 | Alphaflexiviridae | 1048 | White clover mosaic virus (NC_003820.1) | 98.8 | 17.9 |
| White clover mottle virus | PP946269 | Solemoviridae | 3366 | White clover mottle virus (NC_031747.1) | 98.9 | 54.2 |
| Insect viruses | ||||||
| Empoasca fabae solemovirus 1 | PP946277 | Solemoviridae | 3022 | Amygdalus persica sobemo-like virus (QKI29237.1) | 45.1 | 92.8 |
| Empoasca fabae solemovirus 2 | PP946275 | Solemoviridae | 2957 | Amygdalus persica sobemo-like virus (QKI29238.1) | 47.8 | 90.8 |
| Empoasca fabae solemovirus 3 | PP946280 | Solemoviridae | 3025 | Solemoviridae sp. (QXV86398.1) | 50.5 | 100.2 |
| Marma virus RNA 1 | PP946293 | Solemoviridae | 858 | Marma virus RNA1 (OM817544.1) | 99.8 | 27.3 |
| Marma virus RNA 2 | PP946286 | Solemoviridae | 1650 | Marma virus RNA2 (OM817545.1) | 99.6 | 101.5 |
| Empoasca fabae iflavirus 1 | PP946291 | Iflaviridae | 10,877 | Scaphoideus titanus iflavirus 1 (QIJ56901.1) | 46.6 | 101.4 |
| Empoasca fabae lispivirus 1 | PP946292 | Lispiviridae | 14,523 | Hemipteran arli-related virus OKIAV95 (QPL15300.1) | 40.1 | 192.8 |
| Empoasca fabae phenuivirus 1 | PP946285 | Phenuiviridae | 9330 | Blattodean phenui-related virus OKIAV266 (QMP82340.1) | 30.5 | 130.7 |
| Empoasca fabae densovirus 1 | PP946287 | Parvoviridae | 3837 | Motacilla cinerea parvoviridae sp. (QTE03821.1) | 40.0 | 71.1 |