Table 1.
The estimates of DNA sequence polymorphism and tests of neutrality in pfama-1 among KP-Pakistan and global pfama-1
| Isolates | Segregating sites (S) | Singleton variable sites | Parsimony informative sites | Total no. of mutations | K | H | Hd±SD | π±SD | Tajima’s D | Fu and Li’s D | Fu and Li’s F |
|---|---|---|---|---|---|---|---|---|---|---|---|
| KP-Pakistan (n=19) | 69 | 18 | 51 | 69 | 20.409 | 16 | 0.982±0.022 | 0.0109±0.0022 | 0.1391 (P>0.1) | 0.2370 (P>0.1) | 0.2420 (P>0.1) |
| Vietnama (n=131) | 114 | 47 | 67 | 116 | 8.062 | 73 | 0.837±0.034 | 0.0043±0.0006 | −2.0046 (P<0.05) | −3.1913 (P<0.05) | −3.1959 (P<0.05) |
| Myanmarb (n=58) | 78 | 16 | 62 | 79 | 19.886 | 37 | 0.948±0.019 | 0.0106±0.0005 | 0.5719 (P>0.1) | 0.1677 (P>0.1) | 0.3851 (P>0.1) |
| Thailandb (n=80) | 58 | 5 | 53 | 61 | 20.621 | 21 | 0.920±0.013 | 0.0110±0.0002 | 2.2222 (P<0.05) | 0.9572 (P>0.1) | 1.7516 (P<0.05) |
| Philippinesb (n=55) | 61 | 3 | 58 | 62 | 21.232 | 19 | 0.916±0.019 | 0.0114±0.0003 | 1.9545 (0.05<P<0.1) | 1.6123 (P<0.05) | 2.0796 (P<0.05) |
| PNGb (n=90) | 68 | 2 | 66 | 75 | 22.923 | 28 | 0.954±0.007 | 0.0123±0.0002 | 1.8082 (0.05<P<0.1) | 1.6759 (P<0.05) | 2.0760 (P<0.05) |
| SIb (n=50) | 56 | 3 | 53 | 57 | 22.044 | 9 | 0.862±0.021 | 0.0118±0.0003 | 2.5455 (P<0.05) | 1.5447 (P<0.05) | 2.2804 (P<0.05) |
| Vanuatub (n=85) | 50 | 6 | 44 | 50 | 18.905 | 5 | 0.633±0.028 | 0.0101±0.0003 | 2.8973 (P<0.1) | 0.8642 (P>0.1) | 2.0039 (P<0.05) |
| Ghanab (n=37) | 75 | 7 | 68 | 85 | 26.261 | 32 | 0.992±0.008 | 0.0141±0.0003 | 1.0674 (P>0.1) | 1.2179 (P>0.1) | 1.3850 (P>0.1) |
| Tanzaniab (n=62) | 81 | 8 | 73 | 89 | 25.444 | 47 | 0.989±0.005 | 0.0136±0.0002 | 1.1819 (P>0.1) | 1.1635 (P>0.1) | 1.4020 (P>0.1) |